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  5. SOLTUB.AGRIA.G00000028687

SOLTUB.AGRIA.G00000028687


Description : Disease resistance protein RGA2


Gene families : OG_02_0000042 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028687
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_719

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000028614 No alias Disease resistance protein RGA2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028614 No alias Disease resistance protein RGA2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000028614 No alias Disease resistance protein RGA2 0.33 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005622 intracellular anatomical structure IEA AHRD
BP GO:0009416 response to light stimulus IEA AHRD
BP GO:0009620 response to fungus IEA AHRD
BP GO:0010033 response to organic substance IEA AHRD
CC GO:0016020 membrane IEA AHRD
MF GO:0043531 ADP binding IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000164 protein phosphatase type 1 complex IEP Predict GO terms from Neighborhoods
MF GO:0008157 protein phosphatase 1 binding IEP Predict GO terms from Neighborhoods
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0018105 peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018209 peptidyl-serine modification IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0042742 defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0046578 regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0046579 positive regulation of Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050829 defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0051057 positive regulation of small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902533 positive regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
CC GO:1903293 phosphatase complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR041118 Rx_N 5 87
IPR027417 P-loop_NTPase 139 408
IPR002182 NB-ARC 162 395
No external refs found!