SOLTUB.AGRIA.G00000028716

Description : Disease resistance protein RGA2

Gene families : OG_02_0000042 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000028716
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_177

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042742	defense response to bacterium	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
MF	GO:0043531	ADP binding	IEA	AHRD
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002684	positive regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002831	regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0003953	NAD+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009166	nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010941	regulation of cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0010942	positive regulation of cell death	IEP	Predict GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019364	pyridine nucleotide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019677	NAD catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031349	positive regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0032103	positive regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043067	regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0043068	positive regulation of programmed cell death	IEP	Predict GO terms from Neighborhoods
BP	GO:0045088	regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045089	positive regulation of innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050135	NAD(P)+ nucleosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050778	positive regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072526	pyridine-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080027	response to herbivore	IEP	Predict GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	158	395
IPR041118	Rx_N	5	87
IPR027417	P-loop_NTPase	138	409
IPR001611	Leu-rich_rpt	855	913

External Links

No external refs found!

SOLTUB.AGRIA.G00000028716

Expression Profile

Co-expression Networks

Functional Annotation