SOLTUB.AGRIA.G00000029577


Description : Myb transcription factor


Gene families : OG_02_0006613 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029577
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_725


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEA AHRD
BP GO:0001666 response to hypoxia IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
BP GO:0001935 endothelial cell proliferation IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006338 chromatin remodeling IEA AHRD
BP GO:0006816 calcium ion transport IEA AHRD
BP GO:0007141 male meiosis I IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
BP GO:0009414 response to water deprivation IEA AHRD
BP GO:0009738 abscisic acid-activated signaling pathway IEA AHRD
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEA AHRD
BP GO:0010200 response to chitin IEA AHRD
BP GO:0010529 negative regulation of transposition IEA AHRD
BP GO:0010929 positive regulation of auxin mediated signaling pathway IEA AHRD
CC GO:0016363 nuclear matrix IEA AHRD
BP GO:0017145 stem cell division IEA AHRD
BP GO:0019760 glucosinolate metabolic process IEA AHRD
BP GO:0030099 myeloid cell differentiation IEA AHRD
BP GO:0030183 B cell differentiation IEA AHRD
BP GO:0032967 positive regulation of collagen biosynthetic process IEA AHRD
BP GO:0042742 defense response to bacterium IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0043525 positive regulation of neuron apoptotic process IEA AHRD
BP GO:0045624 positive regulation of T-helper cell differentiation IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0048527 lateral root development IEA AHRD
BP GO:0048536 spleen development IEA AHRD
BP GO:0048538 thymus development IEA AHRD
BP GO:0048566 embryonic digestive tract development IEA AHRD
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:0048661 positive regulation of smooth muscle cell proliferation IEA AHRD
BP GO:0048872 homeostasis of number of cells IEA AHRD
BP GO:0051571 positive regulation of histone H3-K4 methylation IEA AHRD
BP GO:0051574 positive regulation of histone H3-K9 methylation IEA AHRD
BP GO:0051782 negative regulation of cell division IEA AHRD
BP GO:0060252 positive regulation of glial cell proliferation IEA AHRD
BP GO:0070301 cellular response to hydrogen peroxide IEA AHRD
BP GO:0071300 cellular response to retinoic acid IEA AHRD
BP GO:0071354 cellular response to interleukin-6 IEA AHRD
BP GO:0071367 cellular response to brassinosteroid stimulus IEA AHRD
BP GO:0071636 positive regulation of transforming growth factor beta production IEA AHRD
MF GO:0071987 WD40-repeat domain binding IEA AHRD
BP GO:0080060 integument development IEA AHRD
BP GO:0080113 regulation of seed growth IEA AHRD
BP GO:1900150 regulation of defense response to fungus IEA AHRD
BP GO:1901001 negative regulation of response to salt stress IEA AHRD
BP GO:1901347 negative regulation of secondary cell wall biogenesis IEA AHRD
BP GO:1901348 positive regulation of secondary cell wall biogenesis IEA AHRD
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEA AHRD
BP GO:1902074 response to salt IEA AHRD
BP GO:1904899 positive regulation of hepatic stellate cell proliferation IEA AHRD
BP GO:1904961 quiescent center organization IEA AHRD
BP GO:1990511 piRNA biosynthetic process IEA AHRD
BP GO:1990830 cellular response to leukemia inhibitory factor IEA AHRD
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEA AHRD
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEA AHRD
BP GO:2000491 positive regulation of hepatic stellate cell activation IEA AHRD
BP GO:2000845 positive regulation of testosterone secretion IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Predict GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0007051 spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0007052 mitotic spindle organization IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009737 response to abscisic acid IEP Predict GO terms from Neighborhoods
CC GO:0031523 Myb complex IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0051225 spindle assembly IEP Predict GO terms from Neighborhoods
BP GO:0070925 organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:0090307 mitotic spindle assembly IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0140694 non-membrane-bounded organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902850 microtubule cytoskeleton organization involved in mitosis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009057 Homeobox-like_sf 246 290
IPR001005 SANT/Myb 66 111
IPR001005 SANT/Myb 247 284
IPR009057 Homeobox-like_sf 67 126
IPR026960 RVT-Znf 191 246
No external refs found!