SOLTUB.AGRIA.G00000029695

Description : Regulator of chromosome condensation (RCC1) family protein

Gene families : OG_02_0016366 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029695
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_726

Type	GO Term	Name	Evidence	Source
BP	GO:0001822	kidney development	None	Extended
BP	GO:0003008	system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005694	chromosome	IEA	AHRD
CC	GO:0005815	microtubule organizing center	IEA	AHRD
CC	GO:0005929	cilium	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007368	determination of left/right symmetry	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	IEA	AHRD
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	IEA	AHRD
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	None	Extended
BP	GO:0009887	animal organ morphogenesis	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0030030	cell projection organization	None	Extended
CC	GO:0031410	cytoplasmic vesicle	IEA	AHRD
CC	GO:0031514	motile cilium	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
CC	GO:0032391	photoreceptor connecting cilium	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0035295	tube development	IEA	AHRD
CC	GO:0035869	ciliary transition zone	None	Extended
MF	GO:0042802	identical protein binding	IEA	AHRD
CC	GO:0042995	cell projection	None	Extended
MF	GO:0043167	ion binding	IEA	AHRD
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044782	cilium organization	IEA	AHRD
BP	GO:0046907	intracellular transport	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048592	eye morphogenesis	IEA	AHRD
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEA	AHRD
BP	GO:0048666	neuron development	IEA	AHRD
BP	GO:0048793	pronephros development	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	IEA	AHRD
BP	GO:0050877	nervous system process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0060429	epithelium development	IEA	AHRD
BP	GO:0061371	determination of heart left/right asymmetry	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090596	sensory organ morphogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:0120036	plasma membrane bounded cell projection organization	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0001669	acrosomal vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0001671	ATPase activator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005813	centrosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0030018	Z disc	IEP	Predict GO terms from Neighborhoods
CC	GO:0030141	secretory granule	IEP	Predict GO terms from Neighborhoods
MF	GO:0031072	heat shock protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032880	regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0044183	protein folding chaperone	IEP	Predict GO terms from Neighborhoods
CC	GO:0048471	perinuclear region of cytoplasm	IEP	Predict GO terms from Neighborhoods
MF	GO:0051082	unfolded protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0051087	chaperone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051129	negative regulation of cellular component organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060341	regulation of cellular localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0060711	labyrinthine layer development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061077	chaperone-mediated protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090083	regulation of inclusion body assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0090084	negative regulation of inclusion body assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0099503	secretory vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000408	Reg_chr_condens	383	434
IPR000408	Reg_chr_condens	440	486
IPR000408	Reg_chr_condens	331	379
IPR009091	RCC1/BLIP-II	22	488

External Links

No external refs found!

SOLTUB.AGRIA.G00000029695

Expression Profile

Co-expression Networks

Functional Annotation