SOLTUB.AGRIA.G00000029712

Description : Laccase

Gene families : OG_02_0016369 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029712
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_129

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009414	response to water deprivation	IEA	AHRD
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009808	lignin metabolic process	None	Extended
BP	GO:0009809	lignin biosynthetic process	IEA	AHRD
BP	GO:0009832	plant-type cell wall biogenesis	None	Extended
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	None	Extended
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046271	phenylpropanoid catabolic process	None	Extended
BP	GO:0046274	lignin catabolic process	IEA	AHRD
BP	GO:0046688	response to copper ion	IEA	AHRD
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
CC	GO:0048226	Casparian strip	IEA	AHRD
BP	GO:0048364	root development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0052716	hydroquinone:oxygen oxidoreductase activity	IEA	AHRD
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080022	primary root development	IEA	AHRD
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000900	mRNA regulatory element binding translation repressor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0000976	transcription cis-regulatory region binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	Predict GO terms from Neighborhoods
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001067	transcription regulatory region nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001708	cell fate specification	IEP	Predict GO terms from Neighborhoods
CC	GO:0001750	photoreceptor outer segment	IEP	Predict GO terms from Neighborhoods
CC	GO:0001917	photoreceptor inner segment	IEP	Predict GO terms from Neighborhoods
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002679	respiratory burst involved in defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0003690	double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004672	protein kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004713	protein tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005217	intracellular ligand-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005221	intracellular cyclic nucleotide activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005223	intracellular cGMP-activated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005911	cell-cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0006468	protein phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006793	phosphorus metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006855	xenobiotic transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006968	cellular defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007031	peroxisome organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009423	chorismate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009506	plasmodesma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009593	detection of chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009595	detection of biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009649	entrainment of circadian clock	IEP	Predict GO terms from Neighborhoods
BP	GO:0009743	response to carbohydrate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009746	response to hexose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009749	response to glucose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009888	tissue development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009909	regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009911	positive regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009933	meristem structural organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009957	epidermal cell fate specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010026	trichome differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0010077	maintenance of inflorescence meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010214	seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010374	stomatal complex development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010440	stomatal lineage progression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010893	positive regulation of steroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0014070	response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
MF	GO:0015247	aminophospholipid flippase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015917	aminophospholipid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016301	kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016310	phosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0016324	apical plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019287	isopentenyl diphosphate biosynthetic process, mevalonate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019899	enzyme binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030054	cell junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030551	cyclic nucleotide binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030552	cAMP binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030553	cGMP binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030658	transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031426	polycistronic mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031542	positive regulation of anthocyanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031625	ubiquitin protein ligase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031663	lipopolysaccharide-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0032370	positive regulation of lipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032496	response to lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0033993	response to lipid	IEP	Predict GO terms from Neighborhoods
MF	GO:0034046	poly(G) binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0034204	lipid translocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034284	response to monosaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0036010	protein localization to endosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Predict GO terms from Neighborhoods
MF	GO:0038023	signaling receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043153	entrainment of circadian clock by photoperiod	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0043425	bHLH transcription factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043455	regulation of secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043855	cyclic nucleotide-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045332	phospholipid translocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045940	positive regulation of steroid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046417	chorismate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046777	protein autophosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048446	petal morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048831	regulation of shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0051606	detection of stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051704	obsolete multi-organism process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
MF	GO:0052582	(+)-menthofuran synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0055038	recycling endosome membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0060089	molecular transducer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061091	regulation of phospholipid translocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061092	positive regulation of phospholipid translocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0062211	root regeneration	IEP	Predict GO terms from Neighborhoods
CC	GO:0070161	anchoring junction	IEP	Predict GO terms from Neighborhoods
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070861	regulation of protein exit from endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0070863	positive regulation of protein exit from endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0071249	cellular response to nitrate	IEP	Predict GO terms from Neighborhoods
BP	GO:0071407	cellular response to organic cyclic compound	IEP	Predict GO terms from Neighborhoods
BP	GO:0071446	cellular response to salicylic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071454	cellular response to anoxia	IEP	Predict GO terms from Neighborhoods
BP	GO:0071497	cellular response to freezing	IEP	Predict GO terms from Neighborhoods
BP	GO:0071588	hydrogen peroxide mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080092	regulation of pollen tube growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0080154	regulation of fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	Predict GO terms from Neighborhoods
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0097035	regulation of membrane lipid distribution	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098581	detection of external biotic stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0098590	plasma membrane region	IEP	Predict GO terms from Neighborhoods
MF	GO:0099094	ligand-gated cation channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0099604	ligand-gated calcium channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102627	parthenolide 3beta-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102628	costunolide 3beta-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0106167	extracellular ATP signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predict GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140326	ATPase-coupled intramembrane lipid transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140327	flippase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140331	aminophospholipid translocation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900377	negative regulation of secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900458	negative regulation of brassinosteroid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:1901528	hydrogen peroxide mediated signaling pathway involved in stomatal movement	IEP	Predict GO terms from Neighborhoods
BP	GO:1901701	cellular response to oxygen-containing compound	IEP	Predict GO terms from Neighborhoods
BP	GO:1902170	cellular response to reactive nitrogen species	IEP	Predict GO terms from Neighborhoods
BP	GO:1902446	regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1902448	positive regulation of shade avoidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1903085	regulation of sinapate ester biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903086	negative regulation of sinapate ester biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1990531	phospholipid-translocating ATPase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:1990837	sequence-specific double-stranded DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2000029	regulation of proanthocyanidin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000488	positive regulation of brassinosteroid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2001138	regulation of phospholipid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:2001140	positive regulation of phospholipid transport	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011706	Cu-oxidase_C	430	553
IPR011707	Cu-oxidase_N	33	144
IPR008972	Cupredoxin	152	348
IPR017761	Laccase	22	571
IPR001117	Cu-oxidase	158	307
IPR008972	Cupredoxin	13	175
IPR008972	Cupredoxin	352	571

External Links

No external refs found!

SOLTUB.AGRIA.G00000029712

Expression Profile

Co-expression Networks

Functional Annotation