SOLTUB.AGRIA.G00000029809


Description : Cullin family protein


Gene families : OG_02_0001737 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029809
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_195


Type GO Term Name Evidence Source
BP GO:0000209 protein polyubiquitination IEA AHRD
CC GO:0000794 condensed nuclear chromosome IEA AHRD
BP GO:0000902 cell morphogenesis IEA AHRD
CC GO:0000922 spindle pole IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
MF GO:0004842 ubiquitin-protein transferase activity IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006283 transcription-coupled nucleotide-excision repair IEA AHRD
BP GO:0006357 regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0006513 protein monoubiquitination IEA AHRD
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEA AHRD
BP GO:0006915 apoptotic process IEA AHRD
BP GO:0007166 cell surface receptor signaling pathway IEA AHRD
CC GO:0009524 phragmoplast IEA AHRD
BP GO:0009734 auxin-activated signaling pathway IEA AHRD
BP GO:0009867 jasmonic acid mediated signaling pathway IEA AHRD
BP GO:0009873 ethylene-activated signaling pathway IEA AHRD
BP GO:0009911 positive regulation of flower development IEA AHRD
CC GO:0009941 chloroplast envelope IEA AHRD
BP GO:0010087 phloem or xylem histogenesis IEA AHRD
BP GO:0010100 negative regulation of photomorphogenesis IEA AHRD
BP GO:0010182 sugar mediated signaling pathway IEA AHRD
CC GO:0016020 membrane IEA AHRD
CC GO:0019005 SCF ubiquitin ligase complex IEA AHRD
BP GO:0030466 silent mating-type cassette heterochromatin formation IEA AHRD
BP GO:0031048 small non-coding RNA-dependent heterochromatin formation IEA AHRD
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEA AHRD
BP GO:0031508 pericentric heterochromatin formation IEA AHRD
BP GO:0031509 subtelomeric heterochromatin formation IEA AHRD
CC GO:0031514 motile cilium IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0033621 nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts IEA AHRD
BP GO:0042254 ribosome biogenesis IEA AHRD
BP GO:0042752 regulation of circadian rhythm IEA AHRD
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA AHRD
CC GO:0043494 CLRC complex IEA AHRD
BP GO:0048468 cell development IEA AHRD
BP GO:0048513 animal organ development IEA AHRD
BP GO:0048575 short-day photoperiodism, flowering IEA AHRD
BP GO:0048598 embryonic morphogenesis IEA AHRD
BP GO:0048825 cotyledon development IEA AHRD
BP GO:0051247 positive regulation of protein metabolic process IEA AHRD
BP GO:0051301 cell division IEA AHRD
BP GO:0051656 establishment of organelle localization IEA AHRD
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEA AHRD
BP GO:1902531 regulation of intracellular signal transduction IEA AHRD
BP GO:2001020 regulation of response to DNA damage stimulus IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0002218 activation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0002237 response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0002240 response to molecule of oomycetes origin IEP Predict GO terms from Neighborhoods
BP GO:0002253 activation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002376 immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002682 regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002764 immune response-regulating signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002831 regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
BP GO:0006012 galactose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006869 lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0006986 response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0007049 cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007368 determination of left/right symmetry IEP Predict GO terms from Neighborhoods
MF GO:0008378 galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009561 megagametogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009855 determination of bilateral symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009866 induced systemic resistance, ethylene mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009991 response to extracellular stimulus IEP Predict GO terms from Neighborhoods
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Predict GO terms from Neighborhoods
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015772 oligosaccharide transport IEP Predict GO terms from Neighborhoods
BP GO:0015773 raffinose transport IEP Predict GO terms from Neighborhoods
BP GO:0015871 choline transport IEP Predict GO terms from Neighborhoods
BP GO:0015908 fatty acid transport IEP Predict GO terms from Neighborhoods
MF GO:0030544 Hsp70 protein binding IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031225 anchored component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031347 regulation of defense response IEP Predict GO terms from Neighborhoods
MF GO:0031434 mitogen-activated protein kinase kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0032101 regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032206 positive regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0032838 plasma membrane bounded cell projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0034620 cellular response to unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0035017 cuticle pattern formation IEP Predict GO terms from Neighborhoods
MF GO:0035250 UDP-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035545 determination of left/right asymmetry in nervous system IEP Predict GO terms from Neighborhoods
BP GO:0035966 response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
BP GO:0035967 cellular response to topologically incorrect protein IEP Predict GO terms from Neighborhoods
CC GO:0036126 sperm flagellum IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0038066 p38MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0039531 regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039532 negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039535 regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039536 negative regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0039552 RIG-I binding IEP Predict GO terms from Neighborhoods
BP GO:0045089 positive regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046662 regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:0046890 regulation of lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0048520 positive regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0050687 negative regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050776 regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0050795 regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0050830 defense response to Gram-positive bacterium IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051365 cellular response to potassium ion starvation IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0051788 response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0052575 carbohydrate localization IEP Predict GO terms from Neighborhoods
BP GO:0052576 carbohydrate storage IEP Predict GO terms from Neighborhoods
BP GO:0062207 regulation of pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071218 cellular response to misfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0071465 cellular response to desiccation IEP Predict GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Predict GO terms from Neighborhoods
BP GO:0080091 regulation of raffinose metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0097224 sperm connecting piece IEP Predict GO terms from Neighborhoods
BP GO:0097501 stress response to metal ion IEP Predict GO terms from Neighborhoods
CC GO:0097729 9+2 motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0099568 cytoplasmic region IEP Predict GO terms from Neighborhoods
CC GO:0120111 neuron projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0140426 PAMP-triggered immunity signalling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901046 positive regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:1901428 regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901430 positive regulation of syringal lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901957 regulation of cutin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902097 positive regulation of transcription from RNA polymerase II promoter involved in defense response to Gram-negative bacterium IEP Predict GO terms from Neighborhoods
BP GO:1902457 negative regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
CC GO:1904115 axon cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:1904158 axonemal central apparatus assembly IEP Predict GO terms from Neighborhoods
BP GO:1990359 stress response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:1990532 stress response to nickel ion IEP Predict GO terms from Neighborhoods
BP GO:1990641 response to iron ion starvation IEP Predict GO terms from Neighborhoods
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001088 trisaccharide transport IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036390 WH_DNA-bd_sf 123 206
IPR001373 Cullin_N 1 114
IPR019559 Cullin_neddylation_domain 141 203
IPR036317 Cullin_homology_sf 1 127
No external refs found!