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  5. SOLTUB.AGRIA.G00000029895

SOLTUB.AGRIA.G00000029895


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_02_0003109 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000029895
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_90


Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0016226 iron-sulfur cluster assembly IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
CC GO:0043229 intracellular organelle IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000324 fungal-type vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003999 adenine phosphoribosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004564 beta-fructofuranosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004575 sucrose alpha-glucosidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005844 polysome IEP Predict GO terms from Neighborhoods
BP GO:0005982 starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005985 sucrose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005987 sucrose catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006166 purine ribonucleoside salvage IEP Predict GO terms from Neighborhoods
BP GO:0006167 AMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006168 adenine salvage IEP Predict GO terms from Neighborhoods
BP GO:0006446 regulation of translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006817 phosphate ion transport IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0007507 heart development IEP Predict GO terms from Neighborhoods
BP GO:0007596 blood coagulation IEP Predict GO terms from Neighborhoods
BP GO:0007599 hemostasis IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
MF GO:0008187 poly-pyrimidine tract binding IEP Predict GO terms from Neighborhoods
MF GO:0008266 poly(U) RNA binding IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009113 purine nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009119 ribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009163 nucleoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009313 oligosaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009413 response to flooding IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010093 specification of floral organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010112 regulation of systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010249 auxin conjugate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0010364 regulation of ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010365 positive regulation of ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010582 floral meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Predict GO terms from Neighborhoods
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016046 detection of fungus IEP Predict GO terms from Neighborhoods
MF GO:0016208 AMP binding IEP Predict GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0018674 (S)-limonene 3-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0018675 (S)-limonene 6-monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0018874 benzoate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019113 limonene monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0031155 regulation of reproductive fruiting body development IEP Predict GO terms from Neighborhoods
CC GO:0031252 cell leading edge IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031335 regulation of sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031337 positive regulation of sulfur amino acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0031369 translation initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0031370 eukaryotic initiation factor 4G binding IEP Predict GO terms from Neighborhoods
BP GO:0032261 purine nucleotide salvage IEP Predict GO terms from Neighborhoods
MF GO:0032440 2-alkenal reductase [NAD(P)+] activity IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035435 phosphate ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035835 indole alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042214 terpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042278 purine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042451 purine nucleoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042455 ribonucleoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0042762 regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043094 cellular metabolic compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043096 purine nucleobase salvage IEP Predict GO terms from Neighborhoods
BP GO:0043101 purine-containing compound salvage IEP Predict GO terms from Neighborhoods
BP GO:0043173 nucleotide salvage IEP Predict GO terms from Neighborhoods
BP GO:0043174 nucleoside salvage IEP Predict GO terms from Neighborhoods
BP GO:0043489 RNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044209 AMP salvage IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046033 AMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046083 adenine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046084 adenine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046112 nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046128 purine ribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046352 disaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046686 response to cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048255 mRNA stabilization IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048449 floral organ formation IEP Predict GO terms from Neighborhoods
BP GO:0048455 stamen formation IEP Predict GO terms from Neighborhoods
BP GO:0048459 floral whorl structural organization IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0050817 coagulation IEP Predict GO terms from Neighborhoods
BP GO:0050878 regulation of body fluid levels IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051176 positive regulation of sulfur metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052318 regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052319 regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052320 positive regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052322 positive regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052575 carbohydrate localization IEP Predict GO terms from Neighborhoods
BP GO:0052576 carbohydrate storage IEP Predict GO terms from Neighborhoods
MF GO:0052579 (+)-pulegone reductase, (+)-isomenthone as substrate, activity IEP Predict GO terms from Neighborhoods
MF GO:0052580 (+)-pulegone reductase, (-)-menthone as substrate, activity IEP Predict GO terms from Neighborhoods
MF GO:0052625 4-aminobenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052626 benzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052627 vanillate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052628 4-hydroxybenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060212 negative regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
BP GO:0060213 positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
MF GO:0070406 glutamine binding IEP Predict GO terms from Neighborhoods
MF GO:0070717 poly-purine tract binding IEP Predict GO terms from Neighborhoods
BP GO:0071836 nectar secretion IEP Predict GO terms from Neighborhoods
BP GO:0075260 regulation of spore-bearing organ development IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
BP GO:0080112 seed growth IEP Predict GO terms from Neighborhoods
MF GO:0090599 alpha-glucosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0090701 specification of plant organ identity IEP Predict GO terms from Neighborhoods
BP GO:0098543 detection of other organism IEP Predict GO terms from Neighborhoods
MF GO:0102934 costunolide synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0106130 purine phosphoribosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0106223 germacrene A hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106380 purine ribonucleotide salvage IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900152 negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900153 positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Predict GO terms from Neighborhoods
BP GO:1900378 positive regulation of secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900908 regulation of olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900910 positive regulation of olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900911 regulation of olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1900913 positive regulation of olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901182 regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901183 positive regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902265 abscisic acid homeostasis IEP Predict GO terms from Neighborhoods
BP GO:1902369 negative regulation of RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902373 negative regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902890 regulation of root hair elongation IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990124 messenger ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001680 WD40_repeat 318 349
IPR001680 WD40_repeat 13 54
IPR001680 WD40_repeat 109 143
IPR001680 WD40_repeat 152 187
IPR001680 WD40_repeat 199 239
IPR001680 WD40_repeat 68 99
IPR036322 WD40_repeat_dom_sf 9 349
No external refs found!