SOLTUB.AGRIA.G00000030037

Description : CHY-type/CTCHY-type/RING-type Zinc finger protein

Gene families : OG_02_0010352 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030037
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_22

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
CC	GO:0000151	ubiquitin ligase complex	IEA	AHRD
MF	GO:0002039	p53 binding	IEA	AHRD
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002832	negative regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005506	iron ion binding	IEA	AHRD
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005783	endoplasmic reticulum	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0006826	iron ion transport	None	Extended
BP	GO:0006873	cellular ion homeostasis	None	Extended
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0006879	cellular iron ion homeostasis	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	AHRD
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009896	positive regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	IEA	AHRD
BP	GO:0010119	regulation of stomatal movement	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010959	regulation of metal ion transport	None	Extended
BP	GO:0016567	protein ubiquitination	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030003	cellular cation homeostasis	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031331	positive regulation of cellular catabolic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031348	negative regulation of defense response	None	Extended
BP	GO:0031396	regulation of protein ubiquitination	None	Extended
BP	GO:0031398	positive regulation of protein ubiquitination	IEA	AHRD
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032102	negative regulation of response to external stimulus	None	Extended
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033212	iron import into cell	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0034755	iron ion transmembrane transport	None	Extended
BP	GO:0034756	regulation of iron ion transport	IEA	AHRD
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042176	regulation of protein catabolic process	None	Extended
BP	GO:0042221	response to chemical	IEA	AHRD
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042594	response to starvation	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045732	positive regulation of protein catabolic process	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0046916	cellular transition metal ion homeostasis	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048871	multicellular organismal homeostasis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051865	protein autoubiquitination	IEA	AHRD
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055072	iron ion homeostasis	None	Extended
BP	GO:0055076	transition metal ion homeostasis	None	Extended
BP	GO:0055080	cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060586	multicellular organismal iron ion homeostasis	IEA	AHRD
BP	GO:0061136	regulation of proteasomal protein catabolic process	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	AHRD
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0098655	cation transmembrane transport	None	Extended
BP	GO:0098657	import into cell	None	Extended
BP	GO:0098659	inorganic cation import across plasma membrane	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:0098711	iron ion import across plasma membrane	IEA	AHRD
BP	GO:0098739	import across plasma membrane	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
BP	GO:0099587	inorganic ion import across plasma membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1900424	regulation of defense response to bacterium	None	Extended
BP	GO:1900425	negative regulation of defense response to bacterium	IEA	AHRD
BP	GO:1901483	regulation of transcription factor catabolic process	None	Extended
BP	GO:1901485	positive regulation of transcription factor catabolic process	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	None	Extended
BP	GO:1902456	regulation of stomatal opening	IEA	AHRD
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903052	positive regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0000911	cytokinesis by cell plate formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001523	retinoid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003978	UDP-glucose 4-epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004753	saccharopine dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005484	SNAP receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005795	Golgi stack	IEP	Predict GO terms from Neighborhoods
BP	GO:0006012	galactose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006067	ethanol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006446	regulation of translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006554	lysine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006757	ATP generation from ADP	IEP	Predict GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008170	N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008276	protein methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009085	lysine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009504	cell plate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009612	response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009969	xyloglucan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010411	xyloglucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010660	regulation of muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010661	positive regulation of muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016079	synaptic vesicle exocytosis	IEP	Predict GO terms from Neighborhoods
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016281	eukaryotic translation initiation factor 4F complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016854	racemase and epimerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	Predict GO terms from Neighborhoods
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019320	hexose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019388	galactose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019477	L-lysine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0023061	signal release	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0031201	SNARE complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033358	UDP-L-arabinose biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0033499	galactose catabolic process via UDP-galactose	IEP	Predict GO terms from Neighborhoods
BP	GO:0034308	primary alcohol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034391	regulation of smooth muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034393	positive regulation of smooth muscle cell apoptotic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042734	presynaptic membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0043022	ribosome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045055	regulated exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045226	extracellular polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045227	capsule polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045230	capsule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0046031	ADP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046379	extracellular polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046440	L-lysine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046883	regulation of hormone secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0046939	nucleotide phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047131	saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048545	response to steroid hormone	IEP	Predict GO terms from Neighborhoods
MF	GO:0050373	UDP-arabinose 4-epimerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061615	glycolytic process through fructose-6-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061620	glycolytic process through glucose-6-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061622	glycolytic process through glucose-1-phosphate	IEP	Predict GO terms from Neighborhoods
BP	GO:0061623	glycolytic process from galactose	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0090549	response to carbon starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0097060	synaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099003	vesicle-mediated transport in synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0099643	signal release from synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0140029	exocytic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0150034	distal axon	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR037275	Znf_CTCHY_sf	102	159
IPR039512	RCHY1_zinc-ribbon	213	271
IPR037274	Znf_CHY_sf	25	101
IPR001841	Znf_RING	165	208
IPR008913	Znf_CHY	30	111

External Links

No external refs found!

SOLTUB.AGRIA.G00000030037

Expression Profile

Co-expression Networks

Functional Annotation