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  5. SOLTUB.AGRIA.G00000030230

SOLTUB.AGRIA.G00000030230


Description : Ribosomal protein S24e family protein, putative


Gene families : OG_02_0010382 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030230
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_183


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000027 ribosomal large subunit assembly IEP Predict GO terms from Neighborhoods
CC GO:0000315 organellar large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000480 endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
CC GO:0000502 proteasome complex IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
BP GO:0001836 release of cytochrome c from mitochondria IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004725 protein tyrosine phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005126 cytokine receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005134 interleukin-2 receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005488 binding IEP Predict GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predict GO terms from Neighborhoods
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predict GO terms from Neighborhoods
CC GO:0005762 mitochondrial large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predict GO terms from Neighborhoods
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006413 translational initiation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006498 N-terminal protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006499 N-terminal protein myristoylation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Predict GO terms from Neighborhoods
BP GO:0006884 cell volume homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0007005 mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0007006 mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007080 mitotic metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0007391 dorsal closure IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Predict GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0008277 regulation of G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008320 protein transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0008540 proteasome regulatory particle, base subcomplex IEP Predict GO terms from Neighborhoods
BP GO:0008637 apoptotic mitochondrial changes IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009895 negative regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Predict GO terms from Neighborhoods
BP GO:0010064 embryonic shoot morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010286 heat acclimation IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010821 regulation of mitochondrion organization IEP Predict GO terms from Neighborhoods
BP GO:0010822 positive regulation of mitochondrion organization IEP Predict GO terms from Neighborhoods
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
CC GO:0016234 inclusion body IEP Predict GO terms from Neighborhoods
BP GO:0016331 morphogenesis of embryonic epithelium IEP Predict GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Predict GO terms from Neighborhoods
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018201 peptidyl-glycine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
BP GO:0018377 protein myristoylation IEP Predict GO terms from Neighborhoods
MF GO:0019107 myristoyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019646 aerobic electron transport chain IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0022400 regulation of rhodopsin mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
MF GO:0022884 macromolecule transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030010 establishment of cell polarity IEP Predict GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0030473 nuclear migration along microtubule IEP Predict GO terms from Neighborhoods
MF GO:0030943 mitochondrion targeting sequence binding IEP Predict GO terms from Neighborhoods
BP GO:0031330 negative regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0031397 negative regulation of protein ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0031505 fungal-type cell wall organization IEP Predict GO terms from Neighborhoods
CC GO:0031597 cytosolic proteasome complex IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0032092 positive regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:0033762 response to glucagon IEP Predict GO terms from Neighborhoods
CC GO:0034357 photosynthetic membrane IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035266 meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0035794 positive regulation of mitochondrial membrane permeability IEP Predict GO terms from Neighborhoods
MF GO:0036402 proteasome-activating activity IEP Predict GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042651 thylakoid membrane IEP Predict GO terms from Neighborhoods
MF GO:0042975 peroxisome proliferator activated receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Predict GO terms from Neighborhoods
BP GO:0043434 response to peptide hormone IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0045202 synapse IEP Predict GO terms from Neighborhoods
CC GO:0045275 respiratory chain complex III IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045794 negative regulation of cell volume IEP Predict GO terms from Neighborhoods
BP GO:0045898 regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0045899 positive regulation of RNA polymerase II transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0046794 transport of virus IEP Predict GO terms from Neighborhoods
BP GO:0046902 regulation of mitochondrial membrane permeability IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048026 positive regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048448 stamen morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048461 flower structural organization IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0050685 positive regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0051303 establishment of chromosome localization IEP Predict GO terms from Neighborhoods
BP GO:0051310 metaphase plate congression IEP Predict GO terms from Neighborhoods
BP GO:0051438 regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051444 negative regulation of ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051647 nucleus localization IEP Predict GO terms from Neighborhoods
MF GO:0055105 ubiquitin-protein transferase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0055106 ubiquitin-protein transferase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0070069 cytochrome complex IEP Predict GO terms from Neighborhoods
BP GO:0070682 proteasome regulatory particle assembly IEP Predict GO terms from Neighborhoods
MF GO:0070851 growth factor receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0071852 fungal-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0072384 organelle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0075525 viral translational termination-reinitiation IEP Predict GO terms from Neighborhoods
BP GO:0075733 intracellular transport of virus IEP Predict GO terms from Neighborhoods
BP GO:0090559 regulation of membrane permeability IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0140318 protein transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900739 regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900740 positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901028 regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901030 positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901652 response to peptide IEP Predict GO terms from Neighborhoods
BP GO:1901798 positive regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902253 regulation of intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902255 positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902659 regulation of glucose mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1903050 regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903747 regulation of establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:1903749 positive regulation of establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:1904666 regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1904667 negative regulation of ubiquitin protein ligase activity IEP Predict GO terms from Neighborhoods
CC GO:1905369 endopeptidase complex IEP Predict GO terms from Neighborhoods
BP GO:1905477 positive regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905710 positive regulation of membrane permeability IEP Predict GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:1990948 ubiquitin ligase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000434 regulation of protein neddylation IEP Predict GO terms from Neighborhoods
BP GO:2000435 negative regulation of protein neddylation IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001244 positive regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035979 RBD_domain_sf 137 222
No external refs found!