SOLTUB.AGRIA.G00000030422

Description : (-)-camphenetricyclene synthase, chloroplastic

Gene families : OG_02_0001090 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030422
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_11

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006714	sesquiterpenoid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008300	isoprenoid catabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009395	phospholipid catabolic process	None	Extended
BP	GO:0009408	response to heat	IEA	AHRD
BP	GO:0009409	response to cold	IEA	AHRD
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009570	chloroplast stroma	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009642	response to light intensity	None	Extended
BP	GO:0009646	response to absence of light	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010333	terpene synthase activity	None	Extended
MF	GO:0010334	sesquiterpene synthase activity	IEA	AHRD
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016106	sesquiterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016115	terpenoid catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	IEA	AHRD
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
MF	GO:0030145	manganese ion binding	IEA	AHRD
BP	GO:0033383	geranyl diphosphate metabolic process	IEA	AHRD
MF	GO:0034009	isoprene synthase activity	IEA	AHRD
BP	GO:0042214	terpene metabolic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043611	isoprene metabolic process	None	Extended
BP	GO:0043612	isoprene biosynthetic process	IEA	AHRD
BP	GO:0043692	monoterpene metabolic process	None	Extended
BP	GO:0043693	monoterpene biosynthetic process	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045338	farnesyl diphosphate metabolic process	None	Extended
BP	GO:0045339	farnesyl diphosphate catabolic process	IEA	AHRD
BP	GO:0046246	terpene biosynthetic process	None	Extended
BP	GO:0046434	organophosphate catabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0050993	dimethylallyl diphosphate metabolic process	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051761	sesquiterpene metabolic process	None	Extended
BP	GO:0051762	sesquiterpene biosynthetic process	IEA	AHRD
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071484	cellular response to light intensity	None	Extended
BP	GO:0071485	cellular response to absence of light	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080027	response to herbivore	IEA	AHRD
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901941	(+)-epi-alpha-bisabolol metabolic process	None	Extended
BP	GO:1901943	(+)-epi-alpha-bisabolol biosynthetic process	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	IEP	Predict GO terms from Neighborhoods
BP	GO:0008037	cell recognition	IEP	Predict GO terms from Neighborhoods
MF	GO:0008168	methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008169	C-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008171	O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009403	toxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009701	isoflavonoid phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009717	isoflavonoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009830	cell wall modification involved in abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0009901	anther dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010047	fruit dehiscence	IEP	Predict GO terms from Neighborhoods
BP	GO:0010227	floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016441	post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
MF	GO:0030746	isoflavone 4'-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032259	methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0033800	isoflavone 7-O-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0044277	cell wall disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046287	isoflavonoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046289	isoflavonoid phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048438	floral whorl development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048467	gynoecium development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048544	recognition of pollen	IEP	Predict GO terms from Neighborhoods
MF	GO:0051787	misfolded protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052314	phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052624	2-phytyl-1,4-naphthoquinone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061635	regulation of protein complex stability	IEP	Predict GO terms from Neighborhoods
BP	GO:0071629	cytoplasm protein quality control by the ubiquitin-proteasome system	IEP	Predict GO terms from Neighborhoods
MF	GO:0080150	S-adenosyl-L-methionine:benzoic acid carboxyl methyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090378	seed trichome elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0140455	cytoplasm protein quality control	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR008949	Isoprenoid_synthase_dom_sf	268	498
IPR008930	Terpenoid_cyclase/PrenylTrfase	76	281
IPR005630	Terpene_synthase_metal-bd	270	399
IPR005630	Terpene_synthase_metal-bd	400	439
IPR001906	Terpene_synth_N	78	265

External Links

No external refs found!

SOLTUB.AGRIA.G00000030422

Expression Profile

Co-expression Networks

Functional Annotation