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  5. SOLTUB.AGRIA.G00000030783

SOLTUB.AGRIA.G00000030783


Description : TdcA1-ORF1-ORF2 protein


Gene families : OG_02_0018033 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030783
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_559

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000018690 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027436 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000037710 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042626 No alias Transposase tnp2 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042862 No alias Transposase tnp2 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018690 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027436 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000037710 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042626 No alias Transposase tnp2 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042862 No alias Transposase tnp2 0.5 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000018690 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000027436 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030945 No alias Transposase tnp2 0.1 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000037710 No alias Transposase tnp2 0.33 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042626 No alias Transposase tnp2 0.11 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000042862 No alias Transposase tnp2 0.5 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004252 Probable_transposase_24 308 442
IPR029480 Transpos_assoc 40 107
No external refs found!