SOLTUB.AGRIA.G00000030833


Description : Myb transcription factor


Gene families : OG_02_0020782 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000030833
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_139


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEA AHRD
BP GO:0001701 in utero embryonic development IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006338 chromatin remodeling IEA AHRD
BP GO:0006816 calcium ion transport IEA AHRD
BP GO:0006974 cellular response to DNA damage stimulus IEA AHRD
BP GO:0007141 male meiosis I IEA AHRD
BP GO:0007283 spermatogenesis IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
BP GO:0008285 negative regulation of cell population proliferation IEA AHRD
BP GO:0009723 response to ethylene IEA AHRD
BP GO:0009733 response to auxin IEA AHRD
BP GO:0009751 response to salicylic acid IEA AHRD
BP GO:0009753 response to jasmonic acid IEA AHRD
BP GO:0010183 pollen tube guidance IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
BP GO:0010262 somatic embryogenesis IEA AHRD
BP GO:0010439 regulation of glucosinolate biosynthetic process IEA AHRD
BP GO:0010529 negative regulation of transposition IEA AHRD
CC GO:0016363 nuclear matrix IEA AHRD
BP GO:0017145 stem cell division IEA AHRD
BP GO:0030099 myeloid cell differentiation IEA AHRD
BP GO:0030183 B cell differentiation IEA AHRD
CC GO:0031523 Myb complex IEA AHRD
CC GO:0042025 host cell nucleus IEA AHRD
BP GO:0043525 positive regulation of neuron apoptotic process IEA AHRD
BP GO:0045624 positive regulation of T-helper cell differentiation IEA AHRD
BP GO:0045691 regulation of embryo sac central cell differentiation IEA AHRD
BP GO:0045697 regulation of synergid differentiation IEA AHRD
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0045995 regulation of embryonic development IEA AHRD
BP GO:0048536 spleen development IEA AHRD
BP GO:0048538 thymus development IEA AHRD
BP GO:0048566 embryonic digestive tract development IEA AHRD
BP GO:0048872 homeostasis of number of cells IEA AHRD
BP GO:0051302 regulation of cell division IEA AHRD
BP GO:0051571 positive regulation of histone H3-K4 methylation IEA AHRD
BP GO:0051574 positive regulation of histone H3-K9 methylation IEA AHRD
BP GO:0055089 fatty acid homeostasis IEA AHRD
BP GO:0071354 cellular response to interleukin-6 IEA AHRD
MF GO:0071987 WD40-repeat domain binding IEA AHRD
BP GO:0090307 mitotic spindle assembly IEA AHRD
BP GO:1901533 negative regulation of hematopoietic progenitor cell differentiation IEA AHRD
BP GO:1901701 cellular response to oxygen-containing compound IEA AHRD
BP GO:1904095 negative regulation of endosperm development IEA AHRD
BP GO:1990511 piRNA biosynthetic process IEA AHRD
BP GO:1990830 cellular response to leukemia inhibitory factor IEA AHRD
BP GO:2000692 negative regulation of seed maturation IEA AHRD
BP GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000578 embryonic axis specification IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005765 lysosomal membrane IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009785 blue light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009798 axis specification IEP Predict GO terms from Neighborhoods
CC GO:0016602 CCAAT-binding factor complex IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0030522 intracellular receptor signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0040029 epigenetic regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0043433 negative regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0051512 positive regulation of unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051865 protein autoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0060320 rejection of self pollen IEP Predict GO terms from Neighborhoods
BP GO:0060816 random inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:1900095 regulation of dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009057 Homeobox-like_sf 116 210
No external refs found!