SOLTUB.AGRIA.G00000003174


Description : Ras-related protein Rab-6A


Gene families : OG_02_0042634 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003174
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_57


Type GO Term Name Evidence Source
CC GO:0000138 Golgi trans cisterna IEA AHRD
CC GO:0000139 Golgi membrane IEA AHRD
BP GO:0000278 mitotic cell cycle IEA AHRD
BP GO:0001558 regulation of cell growth IEA AHRD
MF GO:0003924 GTPase activity IEA AHRD
MF GO:0005525 GTP binding IEA AHRD
CC GO:0005739 mitochondrion IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005813 centrosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006886 intracellular protein transport IEA AHRD
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA AHRD
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA AHRD
BP GO:0007638 mechanosensory behavior IEA AHRD
BP GO:0008344 adult locomotory behavior IEA AHRD
BP GO:0010824 regulation of centrosome duplication IEA AHRD
MF GO:0031489 myosin V binding IEA AHRD
BP GO:0034498 early endosome to Golgi transport IEA AHRD
BP GO:0042335 cuticle development IEA AHRD
BP GO:0044237 cellular metabolic process IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0060471 cortical granule exocytosis IEA AHRD
CC GO:0060473 cortical granule IEA AHRD
BP GO:1903539 protein localization to postsynaptic membrane IEA AHRD
BP GO:2000253 positive regulation of feeding behavior IEA AHRD
BP GO:2000311 regulation of AMPA receptor activity IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000911 cytokinesis by cell plate formation IEP Predict GO terms from Neighborhoods
BP GO:0001541 ovarian follicle development IEP Predict GO terms from Neighborhoods
BP GO:0001881 receptor recycling IEP Predict GO terms from Neighborhoods
BP GO:0002230 positive regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0002790 peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0003925 G protein activity IEP Predict GO terms from Neighborhoods
MF GO:0003958 NADPH-hemoprotein reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0004105 choline-phosphate cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004306 ethanolamine-phosphate cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0005227 calcium activated cation channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005262 calcium channel activity IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEP Predict GO terms from Neighborhoods
BP GO:0006469 negative regulation of protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0006482 protein demethylation IEP Predict GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006644 phospholipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006646 phosphatidylethanolamine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006656 phosphatidylcholine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006657 CDP-choline pathway IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006900 vesicle budding from membrane IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007175 negative regulation of epidermal growth factor-activated receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0007176 regulation of epidermal growth factor-activated receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0008214 protein dealkylation IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
MF GO:0008381 mechanosensitive ion channel activity IEP Predict GO terms from Neighborhoods
BP GO:0009268 response to pH IEP Predict GO terms from Neighborhoods
BP GO:0009306 protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009819 drought recovery IEP Predict GO terms from Neighborhoods
CC GO:0010008 endosome membrane IEP Predict GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Predict GO terms from Neighborhoods
BP GO:0010243 response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010271 regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0015692 lead ion transport IEP Predict GO terms from Neighborhoods
BP GO:0016032 viral process IEP Predict GO terms from Neighborhoods
BP GO:0016226 iron-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0016577 histone demethylation IEP Predict GO terms from Neighborhoods
MF GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0017124 SH3 domain binding IEP Predict GO terms from Neighborhoods
BP GO:0018196 peptidyl-asparagine modification IEP Predict GO terms from Neighborhoods
BP GO:0018279 protein N-linked glycosylation via asparagine IEP Predict GO terms from Neighborhoods
MF GO:0019003 GDP binding IEP Predict GO terms from Neighborhoods
BP GO:0019076 viral release from host cell IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
MF GO:0022839 ion gated channel activity IEP Predict GO terms from Neighborhoods
BP GO:0023061 signal release IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
BP GO:0030072 peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0030073 insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0030641 regulation of cellular pH IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030666 endocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030670 phagocytic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031074 nucleocytoplasmic transport complex IEP Predict GO terms from Neighborhoods
BP GO:0031163 metallo-sulfur cluster assembly IEP Predict GO terms from Neighborhoods
MF GO:0031210 phosphatidylcholine binding IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0031902 late endosome membrane IEP Predict GO terms from Neighborhoods
MF GO:0032266 phosphatidylinositol-3-phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:0032386 regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032400 melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032401 establishment of melanosome localization IEP Predict GO terms from Neighborhoods
BP GO:0032402 melanosome transport IEP Predict GO terms from Neighborhoods
BP GO:0032571 response to vitamin K IEP Predict GO terms from Neighborhoods
CC GO:0032588 trans-Golgi network membrane IEP Predict GO terms from Neighborhoods
BP GO:0032680 regulation of tumor necrosis factor production IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0033572 transferrin transport IEP Predict GO terms from Neighborhoods
BP GO:0033673 negative regulation of kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0034720 histone H3-K4 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0035592 establishment of protein localization to extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0035619 root hair tip IEP Predict GO terms from Neighborhoods
BP GO:0035773 insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0035891 exit from host cell IEP Predict GO terms from Neighborhoods
BP GO:0036245 cellular response to menadione IEP Predict GO terms from Neighborhoods
BP GO:0036257 multivesicular body organization IEP Predict GO terms from Neighborhoods
BP GO:0036258 multivesicular body assembly IEP Predict GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Predict GO terms from Neighborhoods
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042059 negative regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0042169 SH2 domain binding IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0042564 NLS-dependent protein nuclear import complex IEP Predict GO terms from Neighborhoods
CC GO:0042587 glycogen granule IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0043112 receptor metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0043230 extracellular organelle IEP Predict GO terms from Neighborhoods
BP GO:0044000 movement in host IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045054 constitutive secretory pathway IEP Predict GO terms from Neighborhoods
BP GO:0045056 transcytosis IEP Predict GO terms from Neighborhoods
CC GO:0045111 intermediate filament cytoskeleton IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0046337 phosphatidylethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046470 phosphatidylcholine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046745 viral capsid secondary envelopment IEP Predict GO terms from Neighborhoods
BP GO:0046879 hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0046937 phytochelatin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046938 phytochelatin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048670 regulation of collateral sprouting IEP Predict GO terms from Neighborhoods
BP GO:0048672 positive regulation of collateral sprouting IEP Predict GO terms from Neighborhoods
BP GO:0048829 root cap development IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0050730 regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050732 negative regulation of peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
MF GO:0050997 quaternary ammonium group binding IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051452 intracellular pH reduction IEP Predict GO terms from Neighborhoods
BP GO:0051453 regulation of intracellular pH IEP Predict GO terms from Neighborhoods
BP GO:0051648 vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051650 establishment of vesicle localization IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051875 pigment granule localization IEP Predict GO terms from Neighborhoods
BP GO:0051904 pigment granule transport IEP Predict GO terms from Neighborhoods
BP GO:0051905 establishment of pigment granule localization IEP Predict GO terms from Neighborhoods
CC GO:0055038 recycling endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060627 regulation of vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0061097 regulation of protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0061099 negative regulation of protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
MF GO:0061631 ubiquitin conjugating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0062197 cellular response to chemical stress IEP Predict GO terms from Neighborhoods
CC GO:0065010 extracellular membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0070062 extracellular exosome IEP Predict GO terms from Neighborhoods
BP GO:0070076 histone lysine demethylation IEP Predict GO terms from Neighborhoods
MF GO:0070402 NADPH binding IEP Predict GO terms from Neighborhoods
MF GO:0070567 cytidylyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070588 calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070676 intralumenal vesicle formation IEP Predict GO terms from Neighborhoods
BP GO:0070861 regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070862 negative regulation of protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0070887 cellular response to chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0070988 demethylation IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071284 cellular response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0071295 cellular response to vitamin IEP Predict GO terms from Neighborhoods
BP GO:0071307 cellular response to vitamin K IEP Predict GO terms from Neighborhoods
BP GO:0071467 cellular response to pH IEP Predict GO terms from Neighborhoods
BP GO:0071468 cellular response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0071470 cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0071474 cellular hyperosmotic response IEP Predict GO terms from Neighborhoods
BP GO:0071692 protein localization to extracellular region IEP Predict GO terms from Neighborhoods
MF GO:0071949 FAD binding IEP Predict GO terms from Neighborhoods
BP GO:0080187 floral organ senescence IEP Predict GO terms from Neighborhoods
BP GO:0090279 regulation of calcium ion import IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090383 phagosome acidification IEP Predict GO terms from Neighborhoods
BP GO:0090398 cellular senescence IEP Predict GO terms from Neighborhoods
BP GO:0090400 stress-induced premature senescence IEP Predict GO terms from Neighborhoods
MF GO:0090541 MIT domain binding IEP Predict GO terms from Neighborhoods
CC GO:0090543 Flemming body IEP Predict GO terms from Neighborhoods
BP GO:0090601 enucleation IEP Predict GO terms from Neighborhoods
BP GO:0090602 sieve element enucleation IEP Predict GO terms from Neighborhoods
BP GO:0097242 amyloid-beta clearance IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
BP GO:0150093 amyloid-beta clearance by transcytosis IEP Predict GO terms from Neighborhoods
BP GO:1900101 regulation of endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:1900103 positive regulation of endoplasmic reticulum unfolded protein response IEP Predict GO terms from Neighborhoods
BP GO:1901184 regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901185 negative regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901404 regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901406 positive regulation of tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901419 regulation of response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901698 response to nitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:1902457 negative regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1903555 regulation of tumor necrosis factor superfamily cytokine production IEP Predict GO terms from Neighborhoods
CC GO:1903561 extracellular vesicle IEP Predict GO terms from Neighborhoods
BP GO:1903648 positive regulation of chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904116 response to vasopressin IEP Predict GO terms from Neighborhoods
BP GO:1904152 regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
BP GO:1904248 regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904250 positive regulation of age-related resistance IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905161 protein localization to phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905957 regulation of cellular response to alcohol IEP Predict GO terms from Neighborhoods
BP GO:2000008 regulation of protein localization to cell surface IEP Predict GO terms from Neighborhoods
BP GO:2000272 negative regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2001135 regulation of endocytic recycling IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001806 Small_GTPase 158 324
IPR001806 Small_GTPase 11 86
IPR027417 P-loop_NTPase 10 326
No external refs found!