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  5. SOLTUB.AGRIA.G00000031319

SOLTUB.AGRIA.G00000031319


Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein


Gene families : OG_02_0026343 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031319
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_222


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA AHRD
MF GO:0004386 helicase activity IEA AHRD
MF GO:0005509 calcium ion binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005768 endosome IEA AHRD
CC GO:0005802 trans-Golgi network IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006810 transport IEA AHRD
BP GO:0006996 organelle organization IEA AHRD
MF GO:0008094 ATP-dependent activity, acting on DNA IEA AHRD
MF GO:0008186 ATP-dependent activity, acting on RNA IEA AHRD
CC GO:0009506 plasmodesma IEA AHRD
BP GO:0009737 response to abscisic acid IEA AHRD
BP GO:0010468 regulation of gene expression IEA AHRD
BP GO:0022607 cellular component assembly IEA AHRD
CC GO:0032991 protein-containing complex IEA AHRD
BP GO:0048518 positive regulation of biological process IEA AHRD
BP GO:0048519 negative regulation of biological process IEA AHRD
BP GO:0050794 regulation of cellular process IEA AHRD
BP GO:0098542 defense response to other organism IEA AHRD
MF GO:0140098 catalytic activity, acting on RNA IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0006869 lipid transport IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0010565 regulation of cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015908 fatty acid transport IEP Predict GO terms from Neighborhoods
BP GO:0019216 regulation of lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019217 regulation of fatty acid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
BP GO:0032368 regulation of lipid transport IEP Predict GO terms from Neighborhoods
BP GO:0032370 positive regulation of lipid transport IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0051050 positive regulation of transport IEP Predict GO terms from Neighborhoods
BP GO:0062012 regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901506 regulation of acylglycerol transport IEP Predict GO terms from Neighborhoods
BP GO:1901508 positive regulation of acylglycerol transport IEP Predict GO terms from Neighborhoods
BP GO:1905883 regulation of triglyceride transport IEP Predict GO terms from Neighborhoods
BP GO:1905885 positive regulation of triglyceride transport IEP Predict GO terms from Neighborhoods
BP GO:1905952 regulation of lipid localization IEP Predict GO terms from Neighborhoods
BP GO:1905954 positive regulation of lipid localization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002075 NTF2_dom 24 140
IPR000504 RRM_dom 311 370
IPR032710 NTF2-like_dom_sf 23 141
IPR035979 RBD_domain_sf 303 370
IPR011990 TPR-like_helical_dom_sf 414 539
No external refs found!