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  5. SOLTUB.AGRIA.G00000031538

SOLTUB.AGRIA.G00000031538


Description : Glutamate--tRNA ligase, chloroplastic/mitochondrial


Gene families : OG_02_0016535 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000031538
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_35


Type GO Term Name Evidence Source
CC GO:0009536 plastid IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0004312 fatty acid synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004316 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
MF GO:0004373 glycogen (starch) synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004398 histidine decarboxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0005982 starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005997 xylulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006580 ethanolamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006768 biotin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006895 Golgi to endosome transport IEP Predict GO terms from Neighborhoods
BP GO:0006909 phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007264 small GTPase mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007265 Ras protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0008543 fibroblast growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008874 gluconate 5-dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0008875 gluconate dehydrogenase activity IEP Predict GO terms from Neighborhoods
MF GO:0009011 starch synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0009102 biotin biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
CC GO:0009522 photosystem I IEP Predict GO terms from Neighborhoods
CC GO:0009523 photosystem II IEP Predict GO terms from Neighborhoods
BP GO:0009585 red, far-red light phototransduction IEP Predict GO terms from Neighborhoods
BP GO:0009638 phototropism IEP Predict GO terms from Neighborhoods
BP GO:0009692 ethylene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009693 ethylene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009704 de-etiolation IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009765 photosynthesis, light harvesting IEP Predict GO terms from Neighborhoods
BP GO:0009768 photosynthesis, light harvesting in photosystem I IEP Predict GO terms from Neighborhoods
BP GO:0009785 blue light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010021 amylopectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010029 regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Predict GO terms from Neighborhoods
BP GO:0010476 gibberellin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010600 regulation of auxin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010677 negative regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016168 chlorophyll binding IEP Predict GO terms from Neighborhoods
CC GO:0016602 CCAAT-binding factor complex IEP Predict GO terms from Neighborhoods
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
BP GO:0018298 obsolete protein-chromophore linkage IEP Predict GO terms from Neighborhoods
MF GO:0019003 GDP binding IEP Predict GO terms from Neighborhoods
BP GO:0019252 starch biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019321 pentose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019520 aldonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019523 L-idonate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030497 fatty acid elongation IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
CC GO:0031901 early endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0032456 endocytic recycling IEP Predict GO terms from Neighborhoods
BP GO:0032482 Rab protein signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEP Predict GO terms from Neighborhoods
MF GO:0033201 alpha-1,4-glucan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0042439 ethanolamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042470 melanosome IEP Predict GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
BP GO:0043449 cellular alkene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043450 alkene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045921 positive regulation of exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0046176 aldonic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046183 L-idonate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0048440 carpel development IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
CC GO:0048770 pigment granule IEP Predict GO terms from Neighborhoods
CC GO:0055037 recycling endosome IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080006 internode patterning IEP Predict GO terms from Neighborhoods
BP GO:0090227 regulation of red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090229 negative regulation of red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090382 phagosome maturation IEP Predict GO terms from Neighborhoods
CC GO:0098563 intrinsic component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0098993 anchored component of synaptic vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:1900140 regulation of seedling development IEP Predict GO terms from Neighborhoods
BP GO:1900673 olefin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900674 olefin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901160 primary amino compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000306 positive regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000896 amylopectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000904 regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000905 negative regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR021883 LPA1-like 68 145
No external refs found!