Description : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Gene families : OG_02_0023199 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032454 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005737 | cytoplasm | IEA | AHRD |
| CC | GO:0009506 | plasmodesma | IEA | AHRD |
| BP | GO:0010439 | regulation of glucosinolate biosynthetic process | IEA | AHRD |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEA | AHRD |
| MF | GO:0043167 | ion binding | IEA | AHRD |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEA | AHRD |
| MF | GO:0062131 | 3-butenylglucosinolate 2-hydroxylase activity | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000175 | 3'-5'-exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000287 | magnesium ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000729 | DNA double-strand break processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004532 | exoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004540 | ribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008296 | 3'-5'-exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008297 | single-stranded DNA exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008310 | single-stranded DNA 3'-5' exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008852 | exodeoxyribonuclease I activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008859 | exoribonuclease II activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019867 | outer membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030145 | manganese ion binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031047 | gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031297 | replication fork processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031966 | mitochondrial membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031968 | organelle outer membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043621 | protein self-association | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045111 | intermediate filament cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090503 | RNA phosphodiester bond hydrolysis, exonucleolytic | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1905172 | RISC complex binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000628 | regulation of miRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000630 | positive regulation of miRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |