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  5. SOLTUB.AGRIA.G00000032796

SOLTUB.AGRIA.G00000032796


Description : Histidine kinase-, DNA gyrase B


Gene families : OG_02_0020891 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032796
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_83


Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0009926 auxin polar transport IEA AHRD
BP GO:0010305 leaf vascular tissue pattern formation IEA AHRD
BP GO:0019827 stem cell population maintenance IEA AHRD
BP GO:0048364 root development IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000045 autophagosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0000077 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
CC GO:0000123 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0000244 spliceosomal tri-snRNP complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP Predict GO terms from Neighborhoods
BP GO:0000380 alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000387 spliceosomal snRNP assembly IEP Predict GO terms from Neighborhoods
BP GO:0000389 mRNA 3'-splice site recognition IEP Predict GO terms from Neighborhoods
BP GO:0000395 mRNA 5'-splice site recognition IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000466 maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
CC GO:0000974 Prp19 complex IEP Predict GO terms from Neighborhoods
CC GO:0001650 fibrillar center IEP Predict GO terms from Neighborhoods
BP GO:0001667 ameboidal-type cell migration IEP Predict GO terms from Neighborhoods
BP GO:0001967 suckling behavior IEP Predict GO terms from Neighborhoods
BP GO:0002119 nematode larval development IEP Predict GO terms from Neighborhoods
BP GO:0002164 larval development IEP Predict GO terms from Neighborhoods
BP GO:0003008 system process IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005049 nuclear export signal receptor activity IEP Predict GO terms from Neighborhoods
CC GO:0005682 U5 snRNP IEP Predict GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006611 protein export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006904 vesicle docking involved in exocytosis IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007032 endosome organization IEP Predict GO terms from Neighborhoods
BP GO:0007033 vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0007041 lysosomal transport IEP Predict GO terms from Neighborhoods
BP GO:0007254 JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0007276 gamete generation IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007600 sensory perception IEP Predict GO terms from Neighborhoods
BP GO:0007605 sensory perception of sound IEP Predict GO terms from Neighborhoods
BP GO:0007606 sensory perception of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0007608 sensory perception of smell IEP Predict GO terms from Neighborhoods
BP GO:0007610 behavior IEP Predict GO terms from Neighborhoods
BP GO:0007631 feeding behavior IEP Predict GO terms from Neighborhoods
BP GO:0007632 visual behavior IEP Predict GO terms from Neighborhoods
BP GO:0007634 optokinetic behavior IEP Predict GO terms from Neighborhoods
BP GO:0007635 chemosensory behavior IEP Predict GO terms from Neighborhoods
BP GO:0008078 mesodermal cell migration IEP Predict GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008333 endosome to lysosome transport IEP Predict GO terms from Neighborhoods
BP GO:0008406 gonad development IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009653 anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009792 embryo development ending in birth or egg hatching IEP Predict GO terms from Neighborhoods
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Predict GO terms from Neighborhoods
BP GO:0009966 regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0009968 negative regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0010105 negative regulation of ethylene-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010646 regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010648 negative regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010941 regulation of cell death IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0014041 regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0014042 positive regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0015721 bile acid and bile salt transport IEP Predict GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Predict GO terms from Neighborhoods
MF GO:0016273 arginine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016274 protein-arginine N-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0018996 molting cycle, collagen and cuticulin-based cuticle IEP Predict GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0022406 membrane docking IEP Predict GO terms from Neighborhoods
BP GO:0023051 regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0023057 negative regulation of signaling IEP Predict GO terms from Neighborhoods
BP GO:0030098 lymphocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0030307 positive regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0030516 regulation of axon extension IEP Predict GO terms from Neighborhoods
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
MF GO:0030619 U1 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030620 U2 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030623 U5 snRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030897 HOPS complex IEP Predict GO terms from Neighborhoods
CC GO:0031074 nucleocytoplasmic transport complex IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0031150 sorocarp stalk development IEP Predict GO terms from Neighborhoods
BP GO:0031153 slug development involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
BP GO:0032204 regulation of telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0032268 regulation of cellular protein metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033263 CORVET complex IEP Predict GO terms from Neighborhoods
MF GO:0034593 phosphatidylinositol bisphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
CC GO:0035619 root hair tip IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
BP GO:0042048 olfactory behavior IEP Predict GO terms from Neighborhoods
BP GO:0042065 glial cell growth IEP Predict GO terms from Neighborhoods
BP GO:0042303 molting cycle IEP Predict GO terms from Neighborhoods
CC GO:0042565 RNA nuclear export complex IEP Predict GO terms from Neighborhoods
BP GO:0042770 signal transduction in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043067 regulation of programmed cell death IEP Predict GO terms from Neighborhoods
BP GO:0043405 regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043406 positive regulation of MAP kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
BP GO:0043485 endosome to pigment granule transport IEP Predict GO terms from Neighborhoods
BP GO:0043506 regulation of JUN kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043507 positive regulation of JUN kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0044773 mitotic DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0044774 mitotic DNA integrity checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0045176 apical protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045664 regulation of neuron differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045773 positive regulation of axon extension IEP Predict GO terms from Neighborhoods
BP GO:0045880 positive regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045927 positive regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0046488 phosphatidylinositol metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0048066 developmental pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048069 eye pigmentation IEP Predict GO terms from Neighborhoods
BP GO:0048278 vesicle docking IEP Predict GO terms from Neighborhoods
BP GO:0048281 inflorescence morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048519 negative regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048523 negative regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048592 eye morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048768 root hair cell tip growth IEP Predict GO terms from Neighborhoods
BP GO:0050770 regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050772 positive regulation of axonogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050789 regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0050877 nervous system process IEP Predict GO terms from Neighborhoods
BP GO:0050954 sensory perception of mechanical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050994 regulation of lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051092 positive regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
MF GO:0052866 phosphatidylinositol phosphate phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0060036 notochord cell vacuolation IEP Predict GO terms from Neighborhoods
BP GO:0060688 regulation of morphogenesis of a branching structure IEP Predict GO terms from Neighborhoods
BP GO:0061387 regulation of extent of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0061716 miRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0070122 obsolete isopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070298 negative regulation of phosphorelay signal transduction system IEP Predict GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Predict GO terms from Neighborhoods
MF GO:0070530 K63-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0071005 U2-type precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071006 U2-type catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071007 U2-type catalytic step 2 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071011 precatalytic spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071012 catalytic step 1 spliceosome IEP Predict GO terms from Neighborhoods
CC GO:0071014 post-mRNA release spliceosomal complex IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071222 cellular response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0071356 cellular response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071902 positive regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0090596 sensory organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097064 ncRNA export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0097157 pre-mRNA intronic binding IEP Predict GO terms from Neighborhoods
CC GO:0097525 spliceosomal snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0106137 IkappaB kinase complex binding IEP Predict GO terms from Neighborhoods
CC GO:0120114 Sm-like protein family complex IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0140029 exocytic process IEP Predict GO terms from Neighborhoods
BP GO:0140056 organelle localization by membrane tethering IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
BP GO:0150011 regulation of neuron projection arborization IEP Predict GO terms from Neighborhoods
BP GO:0150012 positive regulation of neuron projection arborization IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903131 mononuclear cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1905037 autophagosome organization IEP Predict GO terms from Neighborhoods
BP GO:1905492 positive regulation of branching morphogenesis of a nerve IEP Predict GO terms from Neighborhoods
BP GO:1990428 miRNA transport IEP Predict GO terms from Neighborhoods
BP GO:2000026 regulation of multicellular organismal development IEP Predict GO terms from Neighborhoods
BP GO:2000172 regulation of branching morphogenesis of a nerve IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024975 NOV_C 3706 3784
IPR036890 HATPase_C_sf 1253 1414
No external refs found!