SOLTUB.AGRIA.G00000032847

Description : Long-chain-fatty-acid--CoA ligase 1

Gene families : OG_02_0010671 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000032847
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_216

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005777	peroxisome	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	IEA	AHRD
BP	GO:0007399	nervous system development	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008922	long-chain fatty acid [acyl-carrier-protein] ligase activity	IEA	AHRD
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009941	chloroplast envelope	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
MF	GO:0015645	fatty acid ligase activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016405	CoA-ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0016878	acid-thiol ligase activity	None	Extended
BP	GO:0019637	organophosphate metabolic process	IEA	AHRD
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0030497	fatty acid elongation	IEA	AHRD
CC	GO:0031090	organelle membrane	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0042579	microbody	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	IEA	AHRD
BP	GO:0048731	system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000064	L-ornithine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002221	pattern recognition receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002376	immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002682	regulation of immune system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002694	regulation of leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002764	immune response-regulating signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0002833	positive regulation of response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0003012	muscle system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0003299	muscle hypertrophy in response to stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0003300	cardiac muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0003333	amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0003952	NAD+ synthase (glutamine-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004359	glutaminase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004713	protein tyrosine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004888	transmembrane signaling receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005262	calcium channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005516	calmodulin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006497	protein lipidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006664	glycolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006812	cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006952	defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0006955	immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007166	cell surface receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007267	cell-cell signaling	IEP	Predict GO terms from Neighborhoods
MF	GO:0008066	glutamate receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008324	cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009306	protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0009435	NAD biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009501	amyloplast	IEP	Predict GO terms from Neighborhoods
CC	GO:0009529	plastid intermembrane space	IEP	Predict GO terms from Neighborhoods
BP	GO:0009605	response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009606	tropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009607	response to biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009629	response to gravity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009630	gravitropism	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009660	amyloplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009902	chloroplast relocation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009904	chloroplast accumulation movement	IEP	Predict GO terms from Neighborhoods
CC	GO:0009925	basal plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0010034	response to acetate	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010337	regulation of salicylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010540	basipetal auxin transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0014887	cardiac muscle adaptation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014888	striated muscle adaptation	IEP	Predict GO terms from Neighborhoods
BP	GO:0014896	muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0014897	striated muscle hypertrophy	IEP	Predict GO terms from Neighborhoods
BP	GO:0014898	cardiac muscle hypertrophy in response to stress	IEP	Predict GO terms from Neighborhoods
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015174	basic amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015179	L-amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015189	L-lysine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015802	basic amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015807	L-amino acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015819	lysine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015822	ornithine transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predict GO terms from Neighborhoods
BP	GO:0018108	peptidyl-tyrosine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018212	peptidyl-tyrosine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019359	nicotinamide nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019363	pyridine nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019750	chloroplast localization	IEP	Predict GO terms from Neighborhoods
MF	GO:0022834	ligand-gated channel activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0030957	Tat protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031349	positive regulation of defense response	IEP	Predict GO terms from Neighborhoods
BP	GO:0031663	lipopolysaccharide-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0031969	chloroplast membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0031970	organelle envelope lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031972	chloroplast intermembrane space	IEP	Predict GO terms from Neighborhoods
BP	GO:0032006	regulation of TOR signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0032103	positive regulation of response to external stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032490	detection of molecule of bacterial origin	IEP	Predict GO terms from Neighborhoods
BP	GO:0032497	detection of lipopolysaccharide	IEP	Predict GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034220	ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0034627	'de novo' NAD biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0036211	protein modification process	IEP	Predict GO terms from Neighborhoods
MF	GO:0038023	signaling receptor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0038187	pattern recognition receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042170	plastid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043207	response to external biotic stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0043500	muscle adaptation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	Predict GO terms from Neighborhoods
BP	GO:0045087	innate immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0045176	apical protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048583	regulation of response to stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050776	regulation of immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0050805	negative regulation of synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:0050865	regulation of cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051644	plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051667	establishment of plastid localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051707	response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0051716	cellular response to stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0060089	molecular transducer activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0060860	regulation of floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0060862	negative regulation of floral organ abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0062012	regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070588	calcium ion transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0070887	cellular response to chemical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071230	cellular response to amino acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071260	cellular response to mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071275	cellular response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0071310	cellular response to organic substance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071311	cellular response to acetate	IEP	Predict GO terms from Neighborhoods
BP	GO:0071446	cellular response to salicylic acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0071692	protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080140	regulation of jasmonic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080141	regulation of jasmonic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080142	regulation of salicylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0080144	amino acid homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0089718	amino acid import across plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0097730	non-motile cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0097731	9+0 non-motile cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0097733	photoreceptor cell cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0098542	defense response to other organism	IEP	Predict GO terms from Neighborhoods
BP	GO:0098655	cation transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1900073	regulation of neuromuscular synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:1900074	negative regulation of neuromuscular synaptic transmission	IEP	Predict GO terms from Neighborhoods
BP	GO:1902022	L-lysine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1902458	positive regulation of stomatal opening	IEP	Predict GO terms from Neighborhoods
BP	GO:1902475	L-alpha-amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903352	L-ornithine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903401	L-lysine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1903509	liposaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903826	L-arginine transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990822	basic amino acid transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990823	response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods
BP	GO:1990830	cellular response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000873	AMP-dep_Synth/Lig	88	596

External Links

No external refs found!

SOLTUB.AGRIA.G00000032847

Expression Profile

Co-expression Networks

Functional Annotation