SOLTUB.AGRIA.G00000003360

Description : Peptidylprolyl isomerase

Gene families : OG_02_0021990 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003360
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_221

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEA	AHRD
CC	GO:0000785	chromatin	None	Extended
CC	GO:0000792	heterochromatin	IEA	AHRD
MF	GO:0000976	transcription cis-regulatory region binding	None	Extended
MF	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0000987	cis-regulatory region sequence-specific DNA binding	None	Extended
MF	GO:0001067	transcription regulatory region nucleic acid binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	None	Extended
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005527	macrolide binding	None	Extended
MF	GO:0005528	FK506 binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	AHRD
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010506	regulation of autophagy	None	Extended
BP	GO:0010507	negative regulation of autophagy	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016241	regulation of macroautophagy	None	Extended
BP	GO:0016242	negative regulation of macroautophagy	IEA	AHRD
MF	GO:0016853	isomerase activity	None	Extended
MF	GO:0016859	cis-trans isomerase activity	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030522	intracellular receptor signaling pathway	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
MF	GO:0033218	amide binding	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
BP	GO:0035626	juvenile hormone mediated signaling pathway	IEA	AHRD
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042393	histone binding	IEA	AHRD
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
MF	GO:0043565	sequence-specific DNA binding	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0070594	juvenile hormone response element binding	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
MF	GO:1990837	sequence-specific double-stranded DNA binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000314	organellar small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0001701	in utero embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0001732	formation of cytoplasmic translation initiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0001889	liver development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002939	tRNA N1-guanine methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003743	translation initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003872	6-phosphofructokinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005080	protein kinase C binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005657	replication fork	IEP	Predict GO terms from Neighborhoods
CC	GO:0005763	mitochondrial small ribosomal subunit	IEP	Predict GO terms from Neighborhoods
CC	GO:0005788	endoplasmic reticulum lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006002	fructose 6-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006090	pyruvate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006096	glycolytic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006261	DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006417	regulation of translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006446	regulation of translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006491	N-glycan processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006757	ATP generation from ADP	IEP	Predict GO terms from Neighborhoods
BP	GO:0007131	reciprocal meiotic recombination	IEP	Predict GO terms from Neighborhoods
MF	GO:0008135	translation factor activity, RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008173	RNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008443	phosphofructokinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0009019	tRNA (guanine-N1-)-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009100	glycoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009750	response to fructose	IEP	Predict GO terms from Neighborhoods
BP	GO:0009847	spore germination	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0010960	magnesium ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010977	negative regulation of neuron projection development	IEP	Predict GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0015979	photosynthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016282	eukaryotic 43S preinitiation complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0017177	glucosidase II complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030488	tRNA methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0031345	negative regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0031369	translation initiation factor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031974	membrane-enclosed lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0032040	small-subunit processome	IEP	Predict GO terms from Neighborhoods
BP	GO:0032543	mitochondrial translation	IEP	Predict GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0033290	eukaryotic 48S preinitiation complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034248	regulation of cellular amide metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035825	homologous recombination	IEP	Predict GO terms from Neighborhoods
CC	GO:0043233	organelle lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0044325	transmembrane transporter binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0045182	translation regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046031	ADP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046835	carbohydrate phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046939	nucleotide phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0047334	diphosphate-fructose-6-phosphate 1-phosphotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0051219	phosphoprotein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0052905	tRNA (guanine(9)-N(1))-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061615	glycolytic process through fructose-6-phosphate	IEP	Predict GO terms from Neighborhoods
CC	GO:0070013	intracellular organelle lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0070993	translation preinitiation complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0071540	eukaryotic translation initiation factor 3 complex, eIF3e	IEP	Predict GO terms from Neighborhoods
CC	GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	IEP	Predict GO terms from Neighborhoods
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0075522	IRES-dependent viral translational initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0075525	viral translational termination-reinitiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090646	mitochondrial tRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0140527	reciprocal homologous recombination	IEP	Predict GO terms from Neighborhoods
CC	GO:0140534	endoplasmic reticulum protein-containing complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR041232	NPL	3	95
IPR001179	PPIase_FKBP_dom	459	547

External Links

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SOLTUB.AGRIA.G00000003360

Expression Profile

Co-expression Networks

Functional Annotation