| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000987 | cis-regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001671 | ATPase activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001845 | phagolysosome assembly | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003987 | acetate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004021 | L-alanine:2-oxoglutarate aminotransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004567 | beta-mannosidase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005576 | extracellular region | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005615 | extracellular space | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005618 | cell wall | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005767 | secondary lysosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006083 | acetate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006103 | 2-oxoglutarate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006522 | alanine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006523 | alanine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006524 | alanine catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006536 | glutamate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006537 | glutamate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006629 | lipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006690 | icosanoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006721 | terpenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006782 | protoporphyrinogen IX biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007254 | JNK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007260 | tyrosine phosphorylation of STAT protein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008300 | isoprenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008453 | alanine-glyoxylate transaminase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009078 | pyruvate family amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009079 | pyruvate family amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009080 | pyruvate family amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009299 | mRNA transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009505 | plant-type cell wall | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009555 | pollen development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009685 | gibberellin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009827 | plant-type cell wall modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009900 | dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009954 | proximal/distal pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009962 | regulation of flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009963 | positive regulation of flavonoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010026 | trichome differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010047 | fruit dehiscence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010094 | specification of carpel identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010097 | specification of stamen identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010199 | organ boundary specification between lateral organs and the meristem | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010288 | response to lead ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010344 | seed oilbody biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010371 | regulation of gibberellin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010383 | cell wall polysaccharide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010412 | mannan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010440 | stomatal lineage progression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010466 | negative regulation of peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010594 | regulation of endothelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010596 | negative regulation of endothelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010597 | green leaf volatile biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010633 | negative regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010676 | positive regulation of cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010907 | positive regulation of glucose metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0012510 | trans-Golgi network transport vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015645 | fatty acid ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015923 | mannosidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016042 | lipid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016054 | organic acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016101 | diterpenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016103 | diterpenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016115 | terpenoid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016207 | 4-coumarate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016985 | mannan endo-1,4-beta-mannosidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017085 | response to insecticide | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0018858 | benzoate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019372 | lipoxygenase pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019605 | butyrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019632 | shikimate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019747 | regulation of isoprenoid metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030312 | external encapsulating structure | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030660 | Golgi-associated vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031098 | stress-activated protein kinase signaling cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031539 | positive regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031542 | positive regulation of anthocyanin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031956 | medium-chain fatty acid-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032010 | phagolysosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035864 | response to potassium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035865 | cellular response to potassium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0038066 | p38MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042307 | positive regulation of protein import into nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042733 | embryonic digit morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042851 | L-alanine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042853 | L-alanine catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043065 | positive regulation of apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043455 | regulation of secondary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043619 | regulation of transcription from RNA polymerase II promoter in response to oxidative stress | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043759 | methylbutanoate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044242 | cellular lipid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044282 | small molecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045472 | response to ether | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045487 | gibberellin catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045722 | positive regulation of gluconeogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045861 | negative regulation of proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045913 | positive regulation of carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046459 | short-chain fatty acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046501 | protoporphyrinogen IX metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047635 | alanine-oxo-acid transaminase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047760 | butyrate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047958 | glycine:2-oxoglutarate aminotransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0048046 | apoplast | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048317 | seed morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048437 | floral organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048441 | petal development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048459 | floral whorl structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048509 | regulation of meristem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048530 | fruit morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048577 | negative regulation of short-day photoperiodism, flowering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048657 | anther wall tapetum cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048832 | specification of plant organ number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048833 | specification of floral organ number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048834 | specification of petal number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048859 | formation of anatomical boundary | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050218 | propionate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050750 | low-density lipoprotein particle receptor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050826 | response to freezing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051346 | negative regulation of hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051403 | stress-activated MAPK cascade | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051597 | response to methylmercury | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0052547 | regulation of peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060862 | negative regulation of floral organ abscission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060867 | fruit abscission | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061134 | peptidase regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061687 | detoxification of inorganic compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062012 | regulation of small molecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070201 | regulation of establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070325 | lipoprotein particle receptor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071241 | cellular response to inorganic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071480 | cellular response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071585 | detoxification of cadmium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080112 | seed growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090083 | regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090084 | negative regulation of inclusion body assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090691 | formation of plant organ boundary | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097054 | L-glutamate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0106167 | extracellular ATP signaling | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106286 | (E)-caffeate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106290 | trans-cinnamate-CoA ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901976 | regulation of cell cycle checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901978 | positive regulation of cell cycle checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903013 | response to differentiation-inducing factor 1 | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903338 | regulation of cell wall organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903747 | regulation of establishment of protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903748 | negative regulation of establishment of protein localization to mitochondrion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904289 | regulation of mitotic DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904291 | positive regulation of mitotic DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904383 | response to sodium phosphate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904892 | regulation of receptor signaling pathway via STAT | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904894 | positive regulation of receptor signaling pathway via STAT | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905258 | regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905259 | negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990059 | fruit valve development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990538 | xylan O-acetyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990937 | xylan acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000001 | regulation of DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000003 | positive regulation of DNA damage checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000035 | regulation of stem cell division | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000692 | negative regulation of seed maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |