SOLTUB.AGRIA.G00000033393


Description : Organic cation/carnitine transporter 3


Gene families : OG_02_0002181 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000033393
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_64


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA AHRD
CC GO:0005777 peroxisome IEA AHRD
BP GO:0006836 neurotransmitter transport IEA AHRD
MF GO:0008509 anion transmembrane transporter activity IEA AHRD
CC GO:0009705 plant-type vacuole membrane IEA AHRD
BP GO:0010150 leaf senescence IEA AHRD
MF GO:0015226 carnitine transmembrane transporter activity IEA AHRD
MF GO:0015291 secondary active transmembrane transporter activity IEA AHRD
BP GO:0015711 organic anion transport IEA AHRD
BP GO:0015839 cadaverine transport IEA AHRD
BP GO:0015879 carnitine transport IEA AHRD
MF GO:0022853 active ion transmembrane transporter activity IEA AHRD
CC GO:0031224 intrinsic component of membrane IEA AHRD
BP GO:0034220 ion transmembrane transport IEA AHRD
BP GO:0042631 cellular response to water deprivation IEA AHRD
BP GO:0065008 regulation of biological quality IEA AHRD
BP GO:0070417 cellular response to cold IEA AHRD
BP GO:0071472 cellular response to salt stress IEA AHRD
BP GO:0090493 catecholamine uptake IEA AHRD
CC GO:0098590 plasma membrane region IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP Predict GO terms from Neighborhoods
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0001067 transcription regulatory region nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0001845 phagolysosome assembly IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003987 acetate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004021 L-alanine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004109 coproporphyrinogen oxidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004567 beta-mannosidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004857 enzyme inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0004866 endopeptidase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006083 acetate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006103 2-oxoglutarate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006522 alanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006523 alanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006524 alanine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006537 glutamate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006690 icosanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006721 terpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006782 protoporphyrinogen IX biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007254 JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0007260 tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
BP GO:0008300 isoprenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0008453 alanine-glyoxylate transaminase activity IEP Predict GO terms from Neighborhoods
BP GO:0009078 pyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009079 pyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009080 pyruvate family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009299 mRNA transcription IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009685 gibberellin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009827 plant-type cell wall modification IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009900 dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0009954 proximal/distal pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0009962 regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010026 trichome differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010047 fruit dehiscence IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010097 specification of stamen identity IEP Predict GO terms from Neighborhoods
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP Predict GO terms from Neighborhoods
BP GO:0010288 response to lead ion IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010371 regulation of gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010383 cell wall polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010412 mannan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010440 stomatal lineage progression IEP Predict GO terms from Neighborhoods
BP GO:0010466 negative regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010594 regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010596 negative regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010597 green leaf volatile biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010633 negative regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010676 positive regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010907 positive regulation of glucose metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0015645 fatty acid ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0015923 mannosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0016042 lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016054 organic acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016101 diterpenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016103 diterpenoid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016115 terpenoid catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016207 4-coumarate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predict GO terms from Neighborhoods
MF GO:0016985 mannan endo-1,4-beta-mannosidase activity IEP Predict GO terms from Neighborhoods
BP GO:0017085 response to insecticide IEP Predict GO terms from Neighborhoods
MF GO:0018858 benzoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0019222 regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019372 lipoxygenase pathway IEP Predict GO terms from Neighborhoods
BP GO:0019605 butyrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019632 shikimate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019747 regulation of isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
MF GO:0030414 peptidase inhibitor activity IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031537 regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031539 positive regulation of anthocyanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0031956 medium-chain fatty acid-CoA ligase activity IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
BP GO:0035864 response to potassium ion IEP Predict GO terms from Neighborhoods
BP GO:0035865 cellular response to potassium ion IEP Predict GO terms from Neighborhoods
BP GO:0038066 p38MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042733 embryonic digit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0042851 L-alanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042853 L-alanine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043065 positive regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043455 regulation of secondary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043619 regulation of transcription from RNA polymerase II promoter in response to oxidative stress IEP Predict GO terms from Neighborhoods
MF GO:0043759 methylbutanoate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0044242 cellular lipid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045472 response to ether IEP Predict GO terms from Neighborhoods
BP GO:0045487 gibberellin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045722 positive regulation of gluconeogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045913 positive regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046459 short-chain fatty acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046501 protoporphyrinogen IX metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0047635 alanine-oxo-acid transaminase activity IEP Predict GO terms from Neighborhoods
MF GO:0047760 butyrate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0047958 glycine:2-oxoglutarate aminotransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Predict GO terms from Neighborhoods
BP GO:0048317 seed morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048437 floral organ development IEP Predict GO terms from Neighborhoods
BP GO:0048441 petal development IEP Predict GO terms from Neighborhoods
BP GO:0048459 floral whorl structural organization IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048530 fruit morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048657 anther wall tapetum cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048832 specification of plant organ number IEP Predict GO terms from Neighborhoods
BP GO:0048833 specification of floral organ number IEP Predict GO terms from Neighborhoods
BP GO:0048834 specification of petal number IEP Predict GO terms from Neighborhoods
BP GO:0048859 formation of anatomical boundary IEP Predict GO terms from Neighborhoods
MF GO:0050218 propionate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0050750 low-density lipoprotein particle receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0050826 response to freezing IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051346 negative regulation of hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0051597 response to methylmercury IEP Predict GO terms from Neighborhoods
BP GO:0052547 regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0060255 regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060862 negative regulation of floral organ abscission IEP Predict GO terms from Neighborhoods
BP GO:0060867 fruit abscission IEP Predict GO terms from Neighborhoods
MF GO:0061134 peptidase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0061135 endopeptidase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0061687 detoxification of inorganic compound IEP Predict GO terms from Neighborhoods
BP GO:0062012 regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
MF GO:0070325 lipoprotein particle receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0071585 detoxification of cadmium ion IEP Predict GO terms from Neighborhoods
BP GO:0080090 regulation of primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080112 seed growth IEP Predict GO terms from Neighborhoods
BP GO:0090083 regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090084 negative regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090691 formation of plant organ boundary IEP Predict GO terms from Neighborhoods
BP GO:0090698 post-embryonic plant morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0097054 L-glutamate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0106167 extracellular ATP signaling IEP Predict GO terms from Neighborhoods
MF GO:0106286 (E)-caffeate-CoA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0106290 trans-cinnamate-CoA ligase activity IEP Predict GO terms from Neighborhoods
BP GO:1901976 regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1901978 positive regulation of cell cycle checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903013 response to differentiation-inducing factor 1 IEP Predict GO terms from Neighborhoods
BP GO:1903338 regulation of cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:1903747 regulation of establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:1903748 negative regulation of establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:1904289 regulation of mitotic DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1904291 positive regulation of mitotic DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:1904383 response to sodium phosphate IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904894 positive regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1905258 regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1905259 negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1990059 fruit valve development IEP Predict GO terms from Neighborhoods
MF GO:1990538 xylan O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Predict GO terms from Neighborhoods
BP GO:1990937 xylan acetylation IEP Predict GO terms from Neighborhoods
BP GO:2000001 regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000003 positive regulation of DNA damage checkpoint IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000692 negative regulation of seed maturation IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 57 466
IPR036259 MFS_trans_sf 41 468
No external refs found!