SOLTUB.AGRIA.G00000034726


Description : Cyclin D3


Gene families : OG_02_0005025 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034726
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_30

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000034725 No alias Cyclin D3 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000034725 No alias Cyclin D3 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000034725 No alias Cyclin D3 0.06 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEA AHRD
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0009735 response to cytokinin IEA AHRD
BP GO:0009744 response to sucrose IEA AHRD
BP GO:0009793 embryo development ending in seed dormancy IEA AHRD
BP GO:0010444 guard mother cell differentiation IEA AHRD
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA AHRD
BP GO:0042023 DNA endoreduplication IEA AHRD
BP GO:1901371 regulation of leaf morphogenesis IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predict GO terms from Neighborhoods
CC GO:0000325 plant-type vacuole IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
MF GO:0004016 adenylate cyclase activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006812 cation transport IEP Predict GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006826 iron ion transport IEP Predict GO terms from Neighborhoods
MF GO:0009674 potassium:sodium symporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
MF GO:0009975 cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:0010039 response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0010043 response to zinc ion IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010305 leaf vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010500 transmitting tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010588 cotyledon vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015081 sodium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015293 symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015294 solute:cation symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015370 solute:sodium symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015603 iron chelate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0017148 negative regulation of translation IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Predict GO terms from Neighborhoods
BP GO:0030534 adult behavior IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034755 iron ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0043487 regulation of RNA stability IEP Predict GO terms from Neighborhoods
BP GO:0043488 regulation of mRNA stability IEP Predict GO terms from Neighborhoods
BP GO:0048316 seed development IEP Predict GO terms from Neighborhoods
BP GO:0048438 floral whorl development IEP Predict GO terms from Neighborhoods
BP GO:0048467 gynoecium development IEP Predict GO terms from Neighborhoods
BP GO:0048608 reproductive structure development IEP Predict GO terms from Neighborhoods
BP GO:0048825 cotyledon development IEP Predict GO terms from Neighborhoods
BP GO:0050779 RNA destabilization IEP Predict GO terms from Neighborhoods
MF GO:0051980 iron-nicotianamine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060964 regulation of miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0061013 regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061014 positive regulation of mRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0061157 mRNA destabilization IEP Predict GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080022 primary root development IEP Predict GO terms from Neighborhoods
BP GO:0080050 regulation of seed development IEP Predict GO terms from Neighborhoods
BP GO:0098655 cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098659 inorganic cation import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0099587 inorganic ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1902039 negative regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:1903313 positive regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1990058 fruit replum development IEP Predict GO terms from Neighborhoods
BP GO:1990573 potassium ion import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:2000033 regulation of seed dormancy process IEP Predict GO terms from Neighborhoods
BP GO:2000034 regulation of seed maturation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 330 441
IPR036915 Cyclin-like_sf 312 424
IPR000504 RRM_dom 3 56
IPR036915 Cyclin-like_sf 199 328
IPR006671 Cyclin_N 218 328
IPR035979 RBD_domain_sf 3 84
No external refs found!