SOLTUB.AGRIA.G00000034727


Description : Endo-1,4-beta-xylanase 4


Gene families : OG_02_0002291 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034727
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_67

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000034707 No alias Endo-1,4-beta-xylanase 4 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000034707 No alias Endo-1,4-beta-xylanase 4 0.06 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000034707 No alias Endo-1,4-beta-xylanase 4 0.06 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA AHRD
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA AHRD
CC GO:0005618 cell wall IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0000082 G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
CC GO:0000307 cyclin-dependent protein kinase holoenzyme complex IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005319 lipid transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006805 xenobiotic metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006835 dicarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006855 xenobiotic transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006954 inflammatory response IEP Predict GO terms from Neighborhoods
BP GO:0007565 female pregnancy IEP Predict GO terms from Neighborhoods
MF GO:0008281 sulfonylurea receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0008559 ABC-type xenobiotic transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009624 response to nematode IEP Predict GO terms from Neighborhoods
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009793 embryo development ending in seed dormancy IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0009986 cell surface IEP Predict GO terms from Neighborhoods
BP GO:0010232 vascular transport IEP Predict GO terms from Neighborhoods
MF GO:0010290 chlorophyll catabolite transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010393 galacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010444 guard mother cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010476 gibberellin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010893 positive regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015127 bilirubin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015431 ABC-type glutathione S-conjugate transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015694 mercury ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015718 monocarboxylic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015721 bile acid and bile salt transport IEP Predict GO terms from Neighborhoods
BP GO:0015722 canalicular bile acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015723 bilirubin transport IEP Predict GO terms from Neighborhoods
BP GO:0015732 prostaglandin transport IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015914 phospholipid transport IEP Predict GO terms from Neighborhoods
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predict GO terms from Neighborhoods
BP GO:0016999 antibiotic metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019207 kinase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0019218 regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019887 protein kinase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030002 cellular anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030007 cellular potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030320 cellular monovalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0030570 pectate lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0030644 cellular chloride ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0030653 beta-lactam antibiotic metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031253 cell projection membrane IEP Predict GO terms from Neighborhoods
BP GO:0031427 response to methotrexate IEP Predict GO terms from Neighborhoods
CC GO:0031526 brush border membrane IEP Predict GO terms from Neighborhoods
BP GO:0031960 response to corticosteroid IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032355 response to estradiol IEP Predict GO terms from Neighborhoods
BP GO:0032496 response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0033762 response to glucagon IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0038183 bile acid signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042023 DNA endoreduplication IEP Predict GO terms from Neighborhoods
BP GO:0042178 xenobiotic catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042316 penicillin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0043627 response to estrogen IEP Predict GO terms from Neighborhoods
BP GO:0044703 multi-organism reproductive process IEP Predict GO terms from Neighborhoods
BP GO:0044706 multi-multicellular organism process IEP Predict GO terms from Neighborhoods
BP GO:0044770 cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:0044772 mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:0044786 cell cycle DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0044843 cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045488 pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045490 pectin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045940 positive regulation of steroid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046618 xenobiotic export from cell IEP Predict GO terms from Neighborhoods
BP GO:0046685 response to arsenic-containing substance IEP Predict GO terms from Neighborhoods
CC GO:0046691 intracellular canaliculus IEP Predict GO terms from Neighborhoods
BP GO:0046885 regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046886 positive regulation of hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048235 pollen sperm cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048444 floral organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048446 petal morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048545 response to steroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0050810 regulation of steroid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051384 response to glucocorticoid IEP Predict GO terms from Neighborhoods
BP GO:0055064 chloride ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055075 potassium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055081 anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0055083 monovalent inorganic anion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0070327 thyroid hormone transport IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
BP GO:0070633 transepithelial transport IEP Predict GO terms from Neighborhoods
BP GO:0070741 response to interleukin-6 IEP Predict GO terms from Neighborhoods
BP GO:0071216 cellular response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071219 cellular response to molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0071222 cellular response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0071347 cellular response to interleukin-1 IEP Predict GO terms from Neighborhoods
BP GO:0071354 cellular response to interleukin-6 IEP Predict GO terms from Neighborhoods
BP GO:0071356 cellular response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0071383 cellular response to steroid hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071384 cellular response to corticosteroid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071385 cellular response to glucocorticoid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071548 response to dexamethasone IEP Predict GO terms from Neighborhoods
BP GO:0071549 cellular response to dexamethasone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0071715 icosanoid transport IEP Predict GO terms from Neighborhoods
BP GO:0071716 leukotriene transport IEP Predict GO terms from Neighborhoods
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0072338 cellular lactam metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0097327 response to antineoplastic agent IEP Predict GO terms from Neighborhoods
BP GO:0120188 regulation of bile acid secretion IEP Predict GO terms from Neighborhoods
MF GO:0140359 ABC-type transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0150104 transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:1900618 regulation of shoot system morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901086 benzylpenicillin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901371 regulation of leaf morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:1901654 response to ketone IEP Predict GO terms from Neighborhoods
BP GO:1901655 cellular response to ketone IEP Predict GO terms from Neighborhoods
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
CC GO:1902554 serine/threonine protein kinase complex IEP Predict GO terms from Neighborhoods
CC GO:1902911 protein kinase complex IEP Predict GO terms from Neighborhoods
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:1904486 response to 17alpha-ethynylestradiol IEP Predict GO terms from Neighborhoods
BP GO:1905421 regulation of plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:1990962 xenobiotic transport across blood-brain barrier IEP Predict GO terms from Neighborhoods
BP GO:2000488 positive regulation of brassinosteroid biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001000 GH10_dom 217 474
IPR008979 Galactose-bd-like_sf 76 160
IPR017853 Glycoside_hydrolase_SF 205 510
No external refs found!