SOLTUB.AGRIA.G00000034805


Description : Transcription factor GRAS


Gene families : OG_02_0016850 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034805
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_100


Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEA AHRD
BP GO:0001714 endodermal cell fate specification IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
BP GO:0006355 regulation of DNA-templated transcription IEA AHRD
BP GO:0007584 response to nutrient IEA AHRD
BP GO:0008356 asymmetric cell division IEA AHRD
BP GO:0009610 response to symbiotic fungus IEA AHRD
BP GO:0009630 gravitropism IEA AHRD
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEA AHRD
BP GO:0009956 radial pattern formation IEA AHRD
BP GO:0010247 detection of phosphate ion IEA AHRD
BP GO:0016036 cellular response to phosphate starvation IEA AHRD
BP GO:0036377 arbuscular mycorrhizal association IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0048364 root development IEA AHRD
BP GO:0048366 leaf development IEA AHRD
BP GO:0051457 maintenance of protein location in nucleus IEA AHRD
BP GO:0090378 seed trichome elongation IEA AHRD
BP GO:0090610 bundle sheath cell fate specification IEA AHRD
BP GO:2000273 positive regulation of signaling receptor activity IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Predict GO terms from Neighborhoods
BP GO:0001736 establishment of planar polarity IEP Predict GO terms from Neighborhoods
BP GO:0002084 protein depalmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0002832 negative regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0004312 fatty acid synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0004674 protein serine/threonine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005313 L-glutamate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005342 organic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0006109 regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006558 L-phenylalanine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006952 defense response IEP Predict GO terms from Neighborhoods
BP GO:0007164 establishment of tissue polarity IEP Predict GO terms from Neighborhoods
BP GO:0007165 signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Predict GO terms from Neighborhoods
BP GO:0008306 associative learning IEP Predict GO terms from Neighborhoods
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009423 chorismate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009574 preprophase band IEP Predict GO terms from Neighborhoods
BP GO:0009640 photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009791 post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0009855 determination of bilateral symmetry IEP Predict GO terms from Neighborhoods
BP GO:0009880 embryonic pattern specification IEP Predict GO terms from Neighborhoods
BP GO:0009888 tissue development IEP Predict GO terms from Neighborhoods
BP GO:0009902 chloroplast relocation IEP Predict GO terms from Neighborhoods
BP GO:0009904 chloroplast accumulation movement IEP Predict GO terms from Neighborhoods
BP GO:0009914 hormone transport IEP Predict GO terms from Neighborhoods
CC GO:0009921 auxin efflux carrier complex IEP Predict GO terms from Neighborhoods
CC GO:0009925 basal plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009926 auxin polar transport IEP Predict GO terms from Neighborhoods
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009942 longitudinal axis specification IEP Predict GO terms from Neighborhoods
BP GO:0009958 positive gravitropism IEP Predict GO terms from Neighborhoods
CC GO:0009986 cell surface IEP Predict GO terms from Neighborhoods
MF GO:0010011 auxin binding IEP Predict GO terms from Neighborhoods
BP GO:0010033 response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0010051 xylem and phloem pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010067 procambium histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010072 primary shoot apical meristem specification IEP Predict GO terms from Neighborhoods
BP GO:0010073 meristem maintenance IEP Predict GO terms from Neighborhoods
BP GO:0010087 phloem or xylem histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010089 xylem development IEP Predict GO terms from Neighborhoods
BP GO:0010091 trichome branching IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
BP GO:0010286 heat acclimation IEP Predict GO terms from Neighborhoods
BP GO:0010315 auxin export across the plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0010328 auxin influx transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0010329 auxin efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0010338 leaf formation IEP Predict GO terms from Neighborhoods
BP GO:0010358 leaf shaping IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010540 basipetal auxin transport IEP Predict GO terms from Neighborhoods
MF GO:0010857 calcium-dependent protein kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015180 L-alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015183 L-aspartate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015740 C4-dicarboxylate transport IEP Predict GO terms from Neighborhoods
BP GO:0015800 acidic amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015804 neutral amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015808 L-alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0015813 L-glutamate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015849 organic acid transport IEP Predict GO terms from Neighborhoods
CC GO:0016328 lateral plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0016584 obsolete nucleosome positioning IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016790 thiolester hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0022858 alanine transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0031137 regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
BP GO:0031138 negative regulation of conjugation with cellular fusion IEP Predict GO terms from Neighborhoods
CC GO:0031302 intrinsic component of endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0031348 negative regulation of defense response IEP Predict GO terms from Neighborhoods
MF GO:0031490 chromatin DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0031491 nucleosome binding IEP Predict GO terms from Neighborhoods
MF GO:0031492 nucleosomal DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031936 obsolete negative regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032328 alanine transport IEP Predict GO terms from Neighborhoods
BP GO:0032870 cellular response to hormone stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032950 regulation of beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0033620 Mei2 nuclear dot complex IEP Predict GO terms from Neighborhoods
CC GO:0034064 Tor2-Mei2-Ste11 complex IEP Predict GO terms from Neighborhoods
BP GO:0035017 cuticle pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0035067 negative regulation of histone acetylation IEP Predict GO terms from Neighborhoods
BP GO:0035556 intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0035601 protein deacylation IEP Predict GO terms from Neighborhoods
BP GO:0040008 regulation of growth IEP Predict GO terms from Neighborhoods
BP GO:0040020 regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0042157 lipoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042159 lipoprotein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042595 behavioral response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044380 protein localization to cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0045176 apical protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Predict GO terms from Neighborhoods
BP GO:0045836 positive regulation of meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045910 negative regulation of DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0046417 chorismate metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0048229 gametophyte development IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048581 negative regulation of post-embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048766 root hair initiation IEP Predict GO terms from Neighborhoods
BP GO:0048826 cotyledon morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0048829 root cap development IEP Predict GO terms from Neighborhoods
BP GO:0048830 adventitious root development IEP Predict GO terms from Neighborhoods
BP GO:0050793 regulation of developmental process IEP Predict GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Predict GO terms from Neighborhoods
BP GO:0051211 anisotropic cell growth IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Predict GO terms from Neighborhoods
BP GO:0051665 membrane raft localization IEP Predict GO terms from Neighborhoods
BP GO:0051667 establishment of plastid localization IEP Predict GO terms from Neighborhoods
BP GO:0051785 positive regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051938 L-glutamate import IEP Predict GO terms from Neighborhoods
CC GO:0055038 recycling endosome membrane IEP Predict GO terms from Neighborhoods
BP GO:0060918 auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0060919 auxin import into cell IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0070778 L-aspartate transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0071683 sensory dendrite IEP Predict GO terms from Neighborhoods
BP GO:0072697 protein localization to cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0072698 protein localization to microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0072699 protein localization to cortical microtubule cytoskeleton IEP Predict GO terms from Neighborhoods
BP GO:0080060 integument development IEP Predict GO terms from Neighborhoods
BP GO:0080091 regulation of raffinose metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0080161 auxin transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080162 endoplasmic reticulum to cytosol auxin transport IEP Predict GO terms from Neighborhoods
BP GO:0089718 amino acid import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0090421 embryonic meristem initiation IEP Predict GO terms from Neighborhoods
BP GO:0090436 leaf pavement cell development IEP Predict GO terms from Neighborhoods
BP GO:0090567 reproductive shoot system development IEP Predict GO terms from Neighborhoods
MF GO:0098599 palmitoyl hydrolase activity IEP Predict GO terms from Neighborhoods
BP GO:0098657 import into cell IEP Predict GO terms from Neighborhoods
BP GO:0098712 L-glutamate import across plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0098732 macromolecule deacylation IEP Predict GO terms from Neighborhoods
BP GO:0098734 macromolecule depalmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0098739 import across plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0098936 intrinsic component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0098948 intrinsic component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0098949 intrinsic component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0098951 intrinsic component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099025 anchored component of postsynaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099030 anchored component of postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
CC GO:0099031 anchored component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
CC GO:0099033 anchored component of postsynaptic recycling endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099034 anchored component of postsynaptic endosome membrane IEP Predict GO terms from Neighborhoods
CC GO:0099144 anchored component of synaptic membrane IEP Predict GO terms from Neighborhoods
CC GO:0099146 intrinsic component of postsynaptic density membrane IEP Predict GO terms from Neighborhoods
BP GO:0099175 regulation of postsynapse organization IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0110046 signal transduction involved in cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
MF GO:0140311 protein sequestering activity IEP Predict GO terms from Neighborhoods
MF GO:0140313 molecular sequestering activity IEP Predict GO terms from Neighborhoods
BP GO:0140538 negative regulation of conjugation with zygote IEP Predict GO terms from Neighborhoods
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Predict GO terms from Neighborhoods
BP GO:1901332 negative regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:1901984 negative regulation of protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901995 positive regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902101 positive regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902102 regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902473 regulation of protein localization to synapse IEP Predict GO terms from Neighborhoods
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1902816 regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902817 negative regulation of protein localization to microtubule IEP Predict GO terms from Neighborhoods
BP GO:1902950 regulation of dendritic spine maintenance IEP Predict GO terms from Neighborhoods
BP GO:1905132 regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905134 positive regulation of meiotic chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905189 regulation of metaphase/anaphase transition of meiosis II IEP Predict GO terms from Neighborhoods
BP GO:1905191 positive regulation of metaphase/anaphase transition of meiosis II IEP Predict GO terms from Neighborhoods
BP GO:1905392 plant organ morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:1905393 plant organ formation IEP Predict GO terms from Neighborhoods
BP GO:1905666 regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
BP GO:1905668 positive regulation of protein localization to endosome IEP Predict GO terms from Neighborhoods
BP GO:1905820 positive regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:2000014 regulation of endosperm development IEP Predict GO terms from Neighborhoods
BP GO:2000023 regulation of lateral root development IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000243 positive regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000280 regulation of root development IEP Predict GO terms from Neighborhoods
BP GO:2000757 negative regulation of peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:2001006 regulation of cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005202 TF_GRAS 447 806
No external refs found!