SOLTUB.AGRIA.G00000035550

Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Gene families : OG_02_0002340 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035550
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_218

Type	GO Term	Name	Evidence	Source
BP	GO:0003008	system process	None	Extended
BP	GO:0003013	circulatory system process	None	Extended
BP	GO:0003018	vascular process in circulatory system	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009511	plasmodesmatal endoplasmic reticulum	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0010033	response to organic substance	IEA	AHRD
BP	GO:0010150	leaf senescence	IEA	AHRD
BP	GO:0010232	vascular transport	None	Extended
BP	GO:0010233	phloem transport	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031225	anchored component of membrane	None	Extended
CC	GO:0031226	intrinsic component of plasma membrane	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
CC	GO:0046658	anchored component of plasma membrane	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051607	defense response to virus	IEA	AHRD
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0090693	plant organ senescence	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0110126	phloem loading	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:1901700	response to oxygen-containing compound	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000003	reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004031	aldehyde oxidase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0005976	polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009620	response to fungus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009624	response to nematode	IEP	Predict GO terms from Neighborhoods
BP	GO:0010191	mucilage metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010192	mucilage biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010410	hemicellulose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010413	glucuronoxylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010417	glucuronoxylan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016623	oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0030599	pectinesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032504	multicellular organism reproduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042545	cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0045330	aspartyl esterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045489	pectin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045490	pectin catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045491	xylan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045492	xylan biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050829	defense response to Gram-negative bacterium	IEP	Predict GO terms from Neighborhoods
BP	GO:0052386	cell wall thickening	IEP	Predict GO terms from Neighborhoods
BP	GO:0052546	cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070726	cell wall assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071554	cell wall organization or biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0071668	plant-type cell wall assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0102797	obsolete geranial:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102798	obsolete heptaldehyde:oxygen oxidoreductase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004864	LEA_2	77	177

External Links

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SOLTUB.AGRIA.G00000035550

Expression Profile

Co-expression Networks

Functional Annotation