Description : CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4
Gene families : OG_02_0017021 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000035897 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_264 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000149 | SNARE binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000290 | deadenylation-dependent decapping of nuclear-transcribed mRNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000793 | condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000976 | transcription cis-regulatory region binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001067 | transcription regulatory region nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001505 | regulation of neurotransmitter levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001570 | vasculogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001654 | eye development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001838 | embryonic epithelial tube formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001841 | neural tube formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001956 | positive regulation of neurotransmitter secretion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0002039 | p53 binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002574 | thrombocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002682 | regulation of immune system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002684 | positive regulation of immune system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002694 | regulation of leukocyte activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002699 | positive regulation of immune effector process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002703 | regulation of leukocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002886 | regulation of myeloid leukocyte mediated immunity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005776 | autophagosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006886 | intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006887 | exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007154 | cell communication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007166 | cell surface receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007178 | transmembrane receptor protein serine/threonine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007231 | osmosensory signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007423 | sensory organ development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008272 | sulfate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009267 | cellular response to starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009292 | horizontal gene transfer | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009294 | DNA-mediated transformation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009555 | pollen development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009652 | thigmotropism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009970 | cellular response to sulfate starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010088 | phloem development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010256 | endomembrane system organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010646 | regulation of cell communication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010647 | positive regulation of cell communication | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010698 | acetyltransferase activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016079 | synaptic vesicle exocytosis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016514 | SWI/SNF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017157 | regulation of exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017158 | regulation of calcium ion-dependent exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019905 | syntaxin binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022406 | membrane docking | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023051 | regulation of signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023056 | positive regulation of signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0023061 | signal release | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030099 | myeloid cell differentiation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030117 | membrane coat | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030120 | vesicle coat | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030127 | COPII vesicle coat | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031333 | negative regulation of protein-containing complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031338 | regulation of vesicle fusion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031418 | L-ascorbic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031669 | cellular response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031936 | obsolete negative regulation of chromatin silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033003 | regulation of mast cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033006 | regulation of mast cell activation involved in immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035148 | tube formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035459 | vesicle cargo loading | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035726 | common myeloid progenitor cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036409 | histone H3-K14 acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042221 | response to chemical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042594 | response to starvation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043300 | regulation of leukocyte degranulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043304 | regulation of mast cell degranulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043966 | histone H3 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043972 | histone H3-K23 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044154 | histone H3-K14 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045055 | regulated exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045637 | regulation of myeloid cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045639 | positive regulation of myeloid cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045646 | regulation of erythrocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045648 | positive regulation of erythrocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045740 | positive regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045921 | positive regulation of exocytosis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046928 | regulation of neurotransmitter secretion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048029 | monosaccharide binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048145 | regulation of fibroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048278 | vesicle docking | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048518 | positive regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0048787 | presynaptic active zone membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050776 | regulation of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050789 | regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050805 | negative regulation of synaptic transmission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050806 | positive regulation of synaptic transmission | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050896 | response to stimulus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051019 | mitogen-activated protein kinase binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051170 | import into nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051588 | regulation of neurotransmitter transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051590 | positive regulation of neurotransmitter transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051716 | cellular response to stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055063 | sulfate ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0061908 | phagophore | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062197 | cellular response to chemical stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065007 | biological regulation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070577 | lysine-acetylated histone binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070775 | H3 histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070776 | MOZ/MORF histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070887 | cellular response to chemical stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070971 | endoplasmic reticulum exit site | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071214 | cellular response to abiotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071310 | cellular response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071323 | cellular response to chitin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071470 | cellular response to osmotic stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071484 | cellular response to light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071486 | cellular response to high light intensity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072175 | epithelial tube formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072505 | divalent inorganic anion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090110 | COPII-coated vesicle cargo loading | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097060 | synaptic membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099003 | vesicle-mediated transport in synapse | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099643 | signal release from synapse | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0104004 | cellular response to environmental stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110154 | RNA decapping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110156 | methylguanosine-cap decapping | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140029 | exocytic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140033 | acetylation-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900459 | positive regulation of brassinosteroid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902533 | positive regulation of intracellular signal transduction | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902806 | regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902807 | negative regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903305 | regulation of regulated secretory pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903307 | positive regulation of regulated secretory pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990837 | sequence-specific double-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000134 | negative regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |