Description : Unknown protein
Gene families : OG_02_0001417 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036037 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_10 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SOLTUB.AGRIA.G00000025482 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000031306 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000025482 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000031306 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000025482 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes | |
| SOLTUB.AGRIA.G00000031306 | No alias | Unknown protein | 0.03 | Orthogroups with 8 Potato genotypes |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000243 | commitment complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000451 | rRNA 2'-O-methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000494 | box C/D RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001056 | RNA polymerase III activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001094 | TFIID-class transcription factor complex binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001651 | dense fibrillar component | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001652 | granular component | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001732 | formation of cytoplasmic translation initiation complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001835 | blastocyst hatching | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001882 | nucleoside binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002240 | response to molecule of oomycetes origin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003360 | brainstem development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004363 | glutathione synthase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004806 | triglyceride lipase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005666 | RNA polymerase III complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005736 | RNA polymerase I complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005791 | rough endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006213 | pyrimidine nucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006301 | postreplication repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006356 | regulation of transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006386 | termination of RNA polymerase III transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006403 | RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006750 | glutathione biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007000 | nucleolus organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008143 | poly(A) binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009120 | deoxyribonucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009304 | tRNA transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0015030 | Cajal body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015086 | cadmium ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015692 | lead ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016074 | sno(s)RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016145 | S-glycoside catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016420 | malonyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016469 | proton-transporting two-sector ATPase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017126 | nucleologenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018364 | peptidyl-glutamine methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019184 | nonribosomal peptide biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019759 | glycosinolate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019762 | glucosinolate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019985 | translesion synthesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030330 | DNA damage response, signal transduction by p53 class mediator | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030628 | pre-mRNA 3'-splice site binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031011 | Ino80 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031126 | sno(s)RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031167 | rRNA methylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031428 | box C/D RNP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031672 | A band | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032481 | positive regulation of type I interferon production | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032549 | ribonucleoside binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032648 | regulation of interferon-beta production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032728 | positive regulation of interferon-beta production | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033176 | proton-transporting V-type ATPase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033290 | eukaryotic 48S preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033810 | anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033967 | box C/D RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034517 | ribophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034963 | box C/D RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035188 | hatching | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036009 | protein-glutamine N-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042256 | mature ribosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042344 | indole glucosinolate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042398 | cellular modified amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042436 | indole-containing compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042797 | tRNA transcription by RNA polymerase III | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043124 | negative regulation of I-kappaB kinase/NF-kappaB signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043144 | sno(s)RNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045053 | protein retention in Golgi apparatus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045111 | intermediate filament cytoskeleton | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045773 | positive regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046104 | thymidine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046125 | pyrimidine deoxyribonucleoside metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047165 | flavonol-3-O-beta-glucoside O-malonyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048254 | snoRNA localization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050733 | RS domain binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050736 | O-malonyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055078 | sodium ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060628 | regulation of ER to Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061912 | selective autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070453 | regulation of heme biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070555 | response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070993 | translation preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071004 | U2-type prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071010 | prespliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071347 | cellular response to interleukin-1 | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071366 | cellular response to indolebutyric acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071684 | organism emergence from protective structure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080026 | response to indolebutyric acid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0089701 | U2AF complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097346 | INO80-type complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140426 | PAMP-triggered immunity signalling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901140 | p-coumaryl alcohol transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1904091 | non-ribosomal peptide synthetase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904526 | regulation of microtubule binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990258 | histone glutamine methylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990259 | histone-glutamine methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990861 | Ubp3-Bre5 deubiquitination complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000071 | regulation of defense response by callose deposition | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |