SOLTUB.AGRIA.G00000036329

Description : RAB GTPase A4A

Gene families : OG_02_0003372 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036329
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_112

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	IEA	AHRD
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005525	GTP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
CC	GO:0005886	plasma membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006972	hyperosmotic response	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009504	cell plate	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010008	endosome membrane	None	Extended
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	IEA	AHRD
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030133	transport vesicle	None	Extended
CC	GO:0030427	site of polarized growth	None	Extended
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031901	early endosome membrane	IEA	AHRD
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032456	endocytic recycling	IEA	AHRD
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
CC	GO:0032588	trans-Golgi network membrane	IEA	AHRD
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
CC	GO:0035619	root hair tip	IEA	AHRD
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
CC	GO:0035838	growing cell tip	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042538	hyperosmotic salinity response	IEA	AHRD
BP	GO:0042546	cell wall biogenesis	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
CC	GO:0045177	apical part of cell	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
CC	GO:0051286	cell tip	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
CC	GO:0060187	cell pole	None	Extended
BP	GO:0060627	regulation of vesicle-mediated transport	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
CC	GO:0070382	exocytic vesicle	IEA	AHRD
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IEA	AHRD
CC	GO:0090404	pollen tube tip	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098876	vesicle-mediated transport to the plasma membrane	None	Extended
CC	GO:0099503	secretory vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001675	acrosome assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0001917	photoreceptor inner segment	IEP	Predict GO terms from Neighborhoods
MF	GO:0003841	1-acylglycerol-3-phosphate O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004620	phospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004806	triglyceride lipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005484	SNAP receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005684	U2-type spliceosomal complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005741	mitochondrial outer membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005801	cis-Golgi network	IEP	Predict GO terms from Neighborhoods
CC	GO:0005902	microvillus	IEP	Predict GO terms from Neighborhoods
CC	GO:0005903	brush border	IEP	Predict GO terms from Neighborhoods
BP	GO:0006638	neutral lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006639	acylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006641	triglyceride metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
BP	GO:0006901	vesicle coating	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007338	single fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007507	heart development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007600	sensory perception	IEP	Predict GO terms from Neighborhoods
BP	GO:0007605	sensory perception of sound	IEP	Predict GO terms from Neighborhoods
BP	GO:0007611	learning or memory	IEP	Predict GO terms from Neighborhoods
BP	GO:0007612	learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0007626	locomotory behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0007632	visual behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008306	associative learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008542	visual learning	IEP	Predict GO terms from Neighborhoods
BP	GO:0008589	regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009306	protein secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0009566	fertilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010048	vernalization response	IEP	Predict GO terms from Neighborhoods
BP	GO:0010821	regulation of mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010822	positive regulation of mitochondrion organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0012507	ER to Golgi transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0016024	CDP-diacylglycerol biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019433	triglyceride catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0019788	NEDD8 transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030097	hemopoiesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0030134	COPII-coated ER to Golgi transport vesicle	IEP	Predict GO terms from Neighborhoods
MF	GO:0030507	spectrin binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0030658	transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030662	coated vesicle membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031057	negative regulation of histone modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0031175	neuron projection development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031201	SNARE complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031902	late endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032012	regulation of ARF protein signal transduction	IEP	Predict GO terms from Neighborhoods
CC	GO:0032391	photoreceptor connecting cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0033363	secretory granule organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034389	lipid droplet organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0035065	regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035067	negative regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0035869	ciliary transition zone	IEP	Predict GO terms from Neighborhoods
CC	GO:0036064	ciliary basal body	IEP	Predict GO terms from Neighborhoods
MF	GO:0042171	lysophosphatidic acid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042472	inner ear morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0043523	regulation of neuron apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043525	positive regulation of neuron apoptotic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043687	post-translational protein modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0045116	protein neddylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0045494	photoreceptor cell maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0045879	negative regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0045880	positive regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0046341	CDP-diacylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046461	neutral lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046464	acylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0048200	Golgi transport vesicle coating	IEP	Predict GO terms from Neighborhoods
BP	GO:0048205	COPI coating of Golgi vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0048513	animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048534	hematopoietic or lymphoid organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048579	negative regulation of long-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0050953	sensory perception of light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050954	sensory perception of mechanical stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0050957	equilibrioception	IEP	Predict GO terms from Neighborhoods
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	Predict GO terms from Neighborhoods
BP	GO:0060122	inner ear receptor cell stereocilium organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
MF	GO:0061650	ubiquitin-like protein conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061654	NEDD8 conjugating enzyme activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0070971	endoplasmic reticulum exit site	IEP	Predict GO terms from Neighborhoods
CC	GO:0071007	U2-type catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0071013	catalytic step 2 spliceosome	IEP	Predict GO terms from Neighborhoods
MF	GO:0071617	lysophospholipid acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071692	protein localization to extracellular region	IEP	Predict GO terms from Neighborhoods
BP	GO:0090140	regulation of mitochondrial fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0090141	positive regulation of mitochondrial fission	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
CC	GO:0097038	perinuclear endoplasmic reticulum	IEP	Predict GO terms from Neighborhoods
CC	GO:0098858	actin-based cell projection	IEP	Predict GO terms from Neighborhoods
CC	GO:0098862	cluster of actin-based cell projections	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901216	positive regulation of neuron death	IEP	Predict GO terms from Neighborhoods
BP	GO:1901983	regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901984	negative regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904106	protein localization to microvillus	IEP	Predict GO terms from Neighborhoods
BP	GO:1904970	brush border assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:2000756	regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000757	negative regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	19	178
IPR027417	P-loop_NTPase	13	186

External Links

No external refs found!

SOLTUB.AGRIA.G00000036329

Expression Profile

Co-expression Networks

Functional Annotation