Description : Embryo defective 1703 protein, putative
Gene families : OG_02_0007665 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003672 | |
Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_221 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000002 | mitochondrial genome maintenance | IEP | Predict GO terms from Neighborhoods |
MF | GO:0000049 | tRNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000054 | ribosomal subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000055 | ribosomal large subunit export from nucleus | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000124 | SAGA complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000178 | exosome (RNase complex) | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000429 | carbon catabolite regulation of transcription from RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000430 | regulation of transcription from RNA polymerase II promoter by glucose | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000433 | carbon catabolite repression of transcription from RNA polymerase II promoter by glucose | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
BP | GO:0000959 | mitochondrial RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001510 | RNA methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0001932 | regulation of protein phosphorylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002097 | tRNA wobble base modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002103 | endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | IEP | Predict GO terms from Neighborhoods |
BP | GO:0002926 | tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003676 | nucleic acid binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003723 | RNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003896 | DNA primase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004518 | nuclease activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004519 | endonuclease activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0004860 | protein kinase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0005488 | binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005681 | spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005686 | U2 snRNP | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005689 | U12-type spliceosomal complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005697 | telomerase holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005739 | mitochondrion | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005815 | microtubule organizing center | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005816 | spindle pole body | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005819 | spindle | IEP | Predict GO terms from Neighborhoods |
CC | GO:0005882 | intermediate filament | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006364 | rRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006399 | tRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006469 | negative regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008152 | metabolic process | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008284 | positive regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0008380 | RNA splicing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009451 | RNA modification | IEP | Predict GO terms from Neighborhoods |
CC | GO:0009508 | plastid chromosome | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009794 | regulation of mitotic cell cycle, embryonic | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009894 | regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009895 | negative regulation of catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009965 | leaf morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0009987 | cellular process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010214 | seed coat development | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016072 | rRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016553 | base conversion or substitution editing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016554 | cytidine to uridine editing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016556 | mRNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0016572 | obsolete histone phosphorylation | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0019210 | kinase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030488 | tRNA methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030515 | snoRNA binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0030620 | U2 snRNA binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:0030684 | preribosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0030686 | 90S preribosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0030687 | preribosome, large subunit precursor | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031538 | negative regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031590 | wybutosine metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031591 | wybutosine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031648 | protein destabilization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0031670 | cellular response to nutrient | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032092 | positive regulation of protein binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032259 | methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032434 | regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0033588 | elongator holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0033750 | ribosome localization | IEP | Predict GO terms from Neighborhoods |
CC | GO:0034098 | VCP-NPL4-UFD1 AAA ATPase complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034214 | protein hexamerization | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034395 | regulation of transcription from RNA polymerase II promoter in response to iron | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034396 | negative regulation of transcription from RNA polymerase II promoter in response to iron | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034414 | tRNA 3'-trailer cleavage, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
MF | GO:0034511 | U3 snoRNA binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
MF | GO:0035173 | histone kinase activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0035174 | histone serine kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0035265 | organ growth | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042176 | regulation of protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042177 | negative regulation of protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042273 | ribosomal large subunit biogenesis | IEP | Predict GO terms from Neighborhoods |
CC | GO:0042644 | chloroplast nucleoid | IEP | Predict GO terms from Neighborhoods |
CC | GO:0042646 | plastid nucleoid | IEP | Predict GO terms from Neighborhoods |
BP | GO:0042779 | tRNA 3'-trailer cleavage | IEP | Predict GO terms from Neighborhoods |
MF | GO:0042781 | 3'-tRNA processing endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0043139 | 5'-3' DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043226 | organelle | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043229 | intracellular organelle | IEP | Predict GO terms from Neighborhoods |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043412 | macromolecule modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043414 | macromolecule methylation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0043549 | regulation of kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044085 | cellular component biogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044237 | cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:0044665 | MLL1/2 complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045013 | carbon catabolite repression of transcription | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045014 | carbon catabolite repression of transcription by glucose | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045292 | mRNA cis splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045787 | positive regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045859 | regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045910 | negative regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045977 | positive regulation of mitotic cell cycle, embryonic | IEP | Predict GO terms from Neighborhoods |
BP | GO:0045990 | carbon catabolite regulation of transcription | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046015 | regulation of transcription by glucose | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0046579 | positive regulation of Ras protein signal transduction | IEP | Predict GO terms from Neighborhoods |
CC | GO:0048471 | perinuclear region of cytoplasm | IEP | Predict GO terms from Neighborhoods |
BP | GO:0048530 | fruit morphogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0050790 | regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051057 | positive regulation of small GTPase mediated signal transduction | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051338 | regulation of transferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051347 | positive regulation of transferase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051972 | regulation of telomerase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0051973 | positive regulation of telomerase activity | IEP | Predict GO terms from Neighborhoods |
BP | GO:0055046 | microgametogenesis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0060147 | regulation of post-transcriptional gene silencing | IEP | Predict GO terms from Neighborhoods |
BP | GO:0060966 | regulation of gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061136 | regulation of proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061984 | catabolite repression | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061985 | carbon catabolite repression | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061986 | negative regulation of transcription by glucose | IEP | Predict GO terms from Neighborhoods |
BP | GO:0061987 | negative regulation of transcription from RNA polymerase II promoter by glucose | IEP | Predict GO terms from Neighborhoods |
CC | GO:0070461 | SAGA-type complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0071011 | precatalytic spliceosome | IEP | Predict GO terms from Neighborhoods |
CC | GO:0071339 | MLL1 complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071479 | cellular response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071480 | cellular response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071704 | organic substance metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0071712 | ER-associated misfolded protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0072684 | mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0080156 | mitochondrial mRNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0080178 | 5-carbamoylmethyl uridine residue modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Predict GO terms from Neighborhoods |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:0140547 | acquisition of seed longevity | IEP | Predict GO terms from Neighborhoods |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900368 | regulation of post-transcriptional gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900864 | mitochondrial RNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:1900865 | chloroplast RNA modification | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901259 | chloroplast rRNA processing | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901403 | positive regulation of tetrapyrrole metabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901465 | positive regulation of tetrapyrrole biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:1901799 | negative regulation of proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:1902326 | positive regulation of chlorophyll biosynthetic process | IEP | Predict GO terms from Neighborhoods |
CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:1903050 | regulation of proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904143 | positive regulation of carotenoid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:1904749 | regulation of protein localization to nucleolus | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905267 | endonucleolytic cleavage involved in tRNA processing | IEP | Predict GO terms from Neighborhoods |
CC | GO:1905354 | exoribonuclease complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:1905634 | regulation of protein localization to chromatin | IEP | Predict GO terms from Neighborhoods |
MF | GO:1990275 | preribosome binding | IEP | Predict GO terms from Neighborhoods |
CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000058 | regulation of ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000059 | negative regulation of ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
BP | GO:2000573 | positive regulation of DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
No external refs found! |