Description : NOP56-like pre RNA processing ribonucleoprotein
Gene families : OG_02_0002744 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036702 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_70 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEA | AHRD |
| CC | GO:0005730 | nucleolus | IEA | AHRD |
| CC | GO:0009506 | plasmodesma | IEA | AHRD |
| MF | GO:0030515 | snoRNA binding | IEA | AHRD |
| CC | GO:0031428 | box C/D RNP complex | IEA | AHRD |
| CC | GO:0032040 | small-subunit processome | IEA | AHRD |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000002 | mitochondrial genome maintenance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003941 | L-serine ammonia-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004022 | alcohol dehydrogenase (NAD+) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004024 | alcohol dehydrogenase activity, zinc-dependent | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005657 | replication fork | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006029 | proteoglycan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006493 | protein O-linked glycosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006565 | L-serine catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008721 | D-serine ammonia-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009071 | serine family amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009413 | response to flooding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009436 | glyoxylate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009441 | glycolate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010384 | cell wall proteoglycan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010404 | cell wall hydroxyproline-rich glycoprotein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010405 | arabinogalactan protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0014072 | response to isoquinoline alkaloid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016594 | glycine binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016841 | ammonia-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017116 | single-stranded DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0018114 | threonine racemase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018249 | protein dehydration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018258 | protein O-linked glycosylation via hydroxyproline | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0018455 | alcohol dehydrogenase [NAD(P)+] activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019478 | D-amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030165 | PDZ domain binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030267 | glyoxylate reductase (NADP+) activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030378 | serine racemase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030848 | threo-3-hydroxyaspartate ammonia-lyase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031000 | response to caffeine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031297 | replication fork processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034310 | primary alcohol catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034620 | cellular response to unfolded protein | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036088 | D-serine catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042866 | pyruvate biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043139 | 5'-3' DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043278 | response to morphine | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043279 | response to alkaloid | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043596 | nuclear replication fork | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044806 | G-quadruplex DNA unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045132 | meiotic chromosome segregation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046185 | aldehyde catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046292 | formaldehyde metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046294 | formaldehyde catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046296 | glycolate catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046416 | D-amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046437 | D-amino acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046487 | glyoxylate metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0047661 | amino-acid racemase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048531 | beta-1,3-galactosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051903 | S-(hydroxymethyl)glutathione dehydrogenase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061995 | ATP-dependent protein-DNA complex displacement activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070178 | D-serine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070179 | D-serine biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071932 | replication fork reversal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097046 | replication fork progression beyond termination site | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098781 | ncRNA transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106345 | glyoxylate reductase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110095 | cellular detoxification of aldehyde | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140083 | ATP-dependent protein-DNA unloading activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140445 | chromosome, telomeric repeat region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900037 | regulation of cellular response to hypoxia | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900039 | positive regulation of cellular response to hypoxia | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902183 | regulation of shoot apical meristem development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990714 | hydroxyproline O-galactosyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000621 | regulation of DNA replication termination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001289 | lipid X metabolic process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |