SOLTUB.AGRIA.G00000036731

Description : Galactose oxidase/kelch repeat superfamily protein

Gene families : OG_02_0005061 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036731
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_202

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000036652	No alias	Galactose oxidase/kelch repeat superfamily protein	0.2	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000036652	No alias	Galactose oxidase/kelch repeat superfamily protein	0.2	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000036652	No alias	Galactose oxidase/kelch repeat superfamily protein	0.2	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
CC	GO:0000322	storage vacuole	None	Extended
CC	GO:0000325	plant-type vacuole	None	Extended
CC	GO:0000326	protein storage vacuole	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	None	Extended
CC	GO:0005773	vacuole	None	Extended
CC	GO:0005802	trans-Golgi network	IEA	AHRD
CC	GO:0005856	cytoskeleton	None	Extended
CC	GO:0005929	cilium	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	AHRD
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008360	regulation of cell shape	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0015630	microtubule cytoskeleton	IEA	AHRD
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	IEA	AHRD
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0042995	cell projection	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
CC	GO:0051286	cell tip	IEA	AHRD
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
CC	GO:0060187	cell pole	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0099568	cytoplasmic region	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006029	proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006486	protein glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006493	protein O-linked glycosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008378	galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009100	glycoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010384	cell wall proteoglycan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010404	cell wall hydroxyproline-rich glycoprotein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010405	arabinogalactan protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0018208	peptidyl-proline modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0018258	protein O-linked glycosylation via hydroxyproline	IEP	Predict GO terms from Neighborhoods
BP	GO:0043413	macromolecule glycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0048531	beta-1,3-galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070085	glycosylation	IEP	Predict GO terms from Neighborhoods
MF	GO:1990714	hydroxyproline O-galactosyltransferase activity	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR015915	Kelch-typ_b-propeller	73	327
IPR015915	Kelch-typ_b-propeller	14	61

External Links

No external refs found!

SOLTUB.AGRIA.G00000036731

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation