Description : C2H2 type zinc finger protein
Gene families : OG_02_0006972 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036954 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000109 | nucleotide-excision repair complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000123 | histone acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000124 | SAGA complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000183 | rDNA heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000429 | carbon catabolite regulation of transcription from RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000436 | carbon catabolite activation of transcription from RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000740 | nuclear membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000741 | karyogamy | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000803 | sex chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0001741 | XY body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001786 | phosphatidylserine binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001893 | maternal placenta development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003682 | chromatin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005671 | obsolete Ada2/Gcn5/Ada3 transcription activator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005703 | polytene chromosome puff | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005844 | polysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006123 | mitochondrial electron transport, cytochrome c to oxygen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006259 | DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006281 | DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006298 | mismatch repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006337 | nucleosome disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006458 | 'de novo' protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007167 | enzyme-linked receptor protein signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007169 | transmembrane receptor protein tyrosine kinase signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007349 | cellularization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007447 | imaginal disc pattern formation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008286 | insulin receptor signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009060 | aerobic respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009558 | embryo sac cellularization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009631 | cold acclimation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010197 | polar nucleus fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010198 | synergid death | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010453 | regulation of cell fate commitment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010455 | positive regulation of cell fate commitment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010623 | programmed cell death involved in cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010632 | regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010634 | positive regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015203 | polyamine transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015695 | organic cation transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015839 | cadaverine transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015846 | polyamine transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016514 | SWI/SNF complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016586 | RSC-type complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019646 | aerobic electron transport chain | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022904 | respiratory electron transport chain | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031494 | regulation of mating type switching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031496 | positive regulation of mating type switching | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031507 | heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031670 | cellular response to nutrient | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032435 | negative regulation of proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032986 | protein-DNA complex disassembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0034046 | poly(G) binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034644 | cellular response to UV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035065 | regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035066 | positive regulation of histone acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035222 | wing disc pattern formation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035613 | RNA stem-loop binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035694 | mitochondrial protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042026 | protein refolding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042177 | negative regulation of protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043186 | P granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043966 | histone H3 acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045333 | cellular respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045814 | negative regulation of gene expression, epigenetic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045990 | carbon catabolite regulation of transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045991 | carbon catabolite activation of transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0046695 | SLIK (SAGA-like) complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048026 | positive regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048864 | stem cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050685 | positive regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050807 | regulation of synapse organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051028 | mRNA transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051032 | nucleic acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051033 | RNA transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051084 | 'de novo' post-translational protein folding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051085 | chaperone cofactor-dependent protein refolding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060135 | maternal process involved in female pregnancy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061025 | membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061077 | chaperone-mediated protein folding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070461 | SAGA-type complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070717 | poly-purine tract binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070828 | heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070914 | UV-damage excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071216 | cellular response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071564 | npBAF complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071565 | nBAF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071763 | nuclear membrane organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0072341 | modified amino acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072396 | response to cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072402 | response to DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072423 | response to DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090174 | organelle membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0099174 | regulation of presynapse organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140718 | facultative heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901799 | negative regulation of proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901983 | regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901985 | positive regulation of protein acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902047 | polyamine transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902493 | acetyltransferase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903051 | negative regulation of proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903684 | regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903688 | positive regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1904949 | ATPase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1905368 | peptidase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990124 | messenger ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000059 | negative regulation of ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000331 | regulation of terminal button organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000756 | regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000758 | positive regulation of peptidyl-lysine acetylation | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |