SOLTUB.AGRIA.G00000037018

Description : Pectinesterase

Gene families : OG_02_0017164 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037018
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_195

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004857	enzyme inhibitor activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005886	plasma membrane	IEA	AHRD
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEA	AHRD
CC	GO:0009505	plant-type cell wall	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009620	response to fungus	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	IEA	AHRD
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010191	mucilage metabolic process	IEA	AHRD
BP	GO:0010393	galacturonan metabolic process	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	AHRD
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033037	polysaccharide localization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045488	pectin metabolic process	IEA	AHRD
MF	GO:0046910	pectinesterase inhibitor activity	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0052542	defense response by callose deposition	IEA	AHRD
BP	GO:0052545	callose localization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0065007	biological regulation	IEA	AHRD
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1990110	callus formation	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
BP	GO:0000741	karyogamy	IEP	Predict GO terms from Neighborhoods
MF	GO:0000900	mRNA regulatory element binding translation repressor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002082	regulation of oxidative phosphorylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003846	2-acylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003993	acid phosphatase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004097	catechol oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004142	diacylglycerol cholinephosphotransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004367	glycerol-3-phosphate dehydrogenase [NAD+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004372	glycine hydroxymethyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004622	lysophospholipase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004766	spermidine synthase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005576	extracellular region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005758	mitochondrial intermembrane space	IEP	Predict GO terms from Neighborhoods
CC	GO:0005775	vacuolar lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006116	NADH oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006144	purine nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006544	glycine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006545	glycine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006558	L-phenylalanine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006559	L-phenylalanine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006563	L-serine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006565	L-serine catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006595	polyamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006596	polyamine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006597	spermine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006638	neutral lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006639	acylglycerol metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006656	phosphatidylcholine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006657	CDP-choline pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0006730	one-carbon metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006734	NADH metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008187	poly-pyrimidine tract binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008215	spermine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008216	spermidine metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008266	poly(U) RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008295	spermidine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009063	cellular amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009071	serine family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009295	nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0009309	amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009331	glycerol-3-phosphate dehydrogenase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0009698	phenylpropanoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009800	cinnamic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009803	cinnamic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009806	lignan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009807	lignan biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009853	photorespiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0010197	polar nucleus fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0015691	cadmium ion transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0016054	organic acid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Predict GO terms from Neighborhoods
MF	GO:0016597	amino acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016768	spermine synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predict GO terms from Neighborhoods
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016841	ammonia-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017169	CDP-alcohol phosphatidyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019264	glycine biosynthetic process from serine	IEP	Predict GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019748	secondary metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030371	translation repressor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0031970	organelle envelope lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0033793	aureusidin synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034097	response to cytokine	IEP	Predict GO terms from Neighborhoods
BP	GO:0034340	response to type I interferon	IEP	Predict GO terms from Neighborhoods
BP	GO:0035999	tetrahydrofolate interconversion	IEP	Predict GO terms from Neighborhoods
BP	GO:0036360	sorocarp stalk morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042645	mitochondrial nucleoid	IEP	Predict GO terms from Neighborhoods
MF	GO:0043177	organic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043457	regulation of cellular respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:0044030	regulation of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0045548	phenylalanine ammonia-lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046112	nucleobase biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046461	neutral lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046464	acylglycerol catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046470	phosphatidylcholine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046486	glycerolipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046503	glycerolipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046653	tetrahydrofolate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046655	folic acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046992	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond	IEP	Predict GO terms from Neighborhoods
MF	GO:0046993	oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0047952	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0048027	mRNA 5'-UTR binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051238	sequestering of metal ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051289	protein homotetramerization	IEP	Predict GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052646	alditol phosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0055063	sulfate ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0062125	regulation of mitochondrial gene expression	IEP	Predict GO terms from Neighborhoods
BP	GO:0070129	regulation of mitochondrial translation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070536	protein K63-linked deubiquitination	IEP	Predict GO terms from Neighborhoods
CC	GO:0070552	BRISC complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0070905	serine binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0072505	divalent inorganic anion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0090430	caffeoyl-CoA: alcohol caffeoyl transferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901606	alpha-amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901708	(+)-3'-hydroxylarreatricin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901709	(+)-larreatricin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902221	erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902222	erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1903715	regulation of aerobic respiration	IEP	Predict GO terms from Neighborhoods
BP	GO:1990823	response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods
BP	GO:1990830	cellular response to leukemia inhibitory factor	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	252	556
IPR011050	Pectin_lyase_fold/virulence	248	560
IPR006501	Pectinesterase_inhib_dom	60	204
IPR035513	Invertase/methylesterase_inhib	60	205
IPR006501	Pectinesterase_inhib_dom	30	204

External Links

No external refs found!

SOLTUB.AGRIA.G00000037018

Expression Profile

Co-expression Networks

Functional Annotation