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  5. SOLTUB.AGRIA.G00000037107

SOLTUB.AGRIA.G00000037107


Description : F-box SKIP23-like protein (DUF295)


Gene families : OG_02_0006996 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037107
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_250


Type GO Term Name Evidence Source
BP GO:0050789 regulation of biological process IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0002757 immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002758 innate immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Predict GO terms from Neighborhoods
MF GO:0008171 O-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009627 systemic acquired resistance IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010410 hemicellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010413 glucuronoxylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010417 glucuronoxylan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016763 pentosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019010 farnesoic acid O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0030749 loganate O-methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0031543 peptidyl-proline dioxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0035834 indole alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045491 xylan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045492 xylan biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0047517 1,4-beta-D-xylan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0062034 L-pipecolic acid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0062047 pipecolic acid N-hydroxylase IEP Predict GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Predict GO terms from Neighborhoods
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080027 response to herbivore IEP Predict GO terms from Neighborhoods
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 48
IPR036047 F-box-like_dom_sf 4 49
IPR005174 DUF295 312 347
No external refs found!