SOLTUB.AGRIA.G00000037191

Description : F-box protein

Gene families : OG_02_0003625 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037191
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_9

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	AHRD
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030246	carbohydrate binding	IEA	AHRD
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003756	protein disulfide isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006644	phospholipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008300	isoprenoid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009395	phospholipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009403	toxin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009404	toxin metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009658	chloroplast organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009685	gibberellin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009686	gibberellin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0009905	ent-copalyl diphosphate synthase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0010333	terpene synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0016042	lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016101	diterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016115	terpenoid catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016836	hydro-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Predict GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033385	geranylgeranyl diphosphate metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0042214	terpene metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0043621	protein self-association	IEP	Predict GO terms from Neighborhoods
BP	GO:0044242	cellular lipid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046246	terpene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051501	diterpene phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051502	diterpene phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052314	phytoalexin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0052315	phytoalexin biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0106242	kolavenyl diphosphate synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1901944	miltiradiene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901946	miltiradiene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902241	copal-8-ol diphosphate(3-) metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902243	copal-8-ol diphosphate(3-) biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902247	geranylgeranyl diphosphate catabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR025886	PP2-like	7	130

External Links

No external refs found!

SOLTUB.AGRIA.G00000037191

Expression Profile

Co-expression Networks

Functional Annotation