SOLTUB.AGRIA.G00000037416

Description : Deoxycytidine kinase

Gene families : OG_02_0011220 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037416
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_39

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000287	magnesium ion binding	IEA	AHRD
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001884	pyrimidine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004136	deoxyadenosine kinase activity	IEA	AHRD
MF	GO:0004137	deoxycytidine kinase activity	IEA	AHRD
MF	GO:0004138	deoxyguanosine kinase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEA	AHRD
BP	GO:0006213	pyrimidine nucleoside metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006264	mitochondrial DNA replication	IEA	AHRD
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009116	nucleoside metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009120	deoxyribonucleoside metabolic process	None	Extended
BP	GO:0009123	nucleoside monophosphate metabolic process	None	Extended
BP	GO:0009124	nucleoside monophosphate biosynthetic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEA	AHRD
BP	GO:0009151	purine deoxyribonucleotide metabolic process	IEA	AHRD
BP	GO:0009157	deoxyribonucleoside monophosphate biosynthetic process	IEA	AHRD
BP	GO:0009162	deoxyribonucleoside monophosphate metabolic process	None	Extended
BP	GO:0009262	deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009394	2'-deoxyribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
MF	GO:0019136	deoxynucleoside kinase activity	None	Extended
MF	GO:0019205	nucleobase-containing compound kinase activity	None	Extended
MF	GO:0019206	nucleoside kinase activity	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019692	deoxyribose phosphate metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032042	mitochondrial DNA metabolic process	IEA	AHRD
MF	GO:0032546	deoxyribonucleoside binding	None	Extended
MF	GO:0032548	pyrimidine deoxyribonucleoside binding	IEA	AHRD
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042278	purine nucleoside metabolic process	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046092	deoxycytidine metabolic process	IEA	AHRD
BP	GO:0046125	pyrimidine deoxyribonucleoside metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0046939	nucleotide phosphorylation	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
CC	GO:0070013	intracellular organelle lumen	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEA	AHRD
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	IEA	AHRD
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0004072	aspartate kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004088	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004412	homoserine dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006222	UMP biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006520	cellular amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006525	arginine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006526	arginine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006536	glutamate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006541	glutamine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006553	lysine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006555	methionine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006566	threonine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006996	organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007416	synapse assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007529	establishment of synaptic specificity at neuromuscular junction	IEP	Predict GO terms from Neighborhoods
BP	GO:0008652	cellular amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0008940	nitrate reductase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009069	serine family amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009085	lysine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009086	methionine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009088	threonine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009089	lysine biosynthetic process via diaminopimelate	IEP	Predict GO terms from Neighborhoods
BP	GO:0009090	homoserine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009092	homoserine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009129	pyrimidine nucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009130	pyrimidine nucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009173	pyrimidine ribonucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009174	pyrimidine ribonucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009532	plastid stroma	IEP	Predict GO terms from Neighborhoods
CC	GO:0009570	chloroplast stroma	IEP	Predict GO terms from Neighborhoods
BP	GO:0009657	plastid organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0014069	postsynaptic density	IEP	Predict GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016553	base conversion or substitution editing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016554	cytidine to uridine editing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	Predict GO terms from Neighborhoods
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	Predict GO terms from Neighborhoods
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predict GO terms from Neighborhoods
BP	GO:0018315	molybdenum incorporation into molybdenum-molybdopterin complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0019202	amino acid kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0019897	extrinsic component of plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0030151	molybdenum ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031503	protein-containing complex localization	IEP	Predict GO terms from Neighborhoods
BP	GO:0032324	molybdopterin cofactor biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034329	cell junction assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0034330	cell junction organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0034331	cell junction maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0035418	protein localization to synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0042040	metal incorporation into metallo-molybdopterin complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0043113	receptor clustering	IEP	Predict GO terms from Neighborhoods
BP	GO:0043200	response to amino acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0043546	molybdopterin cofactor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043954	cellular component maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0044205	'de novo' UMP biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0045211	postsynaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0046049	UMP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046451	diaminopimelate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0050661	NADP binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0050808	synapse organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0050897	cobalt ion binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051189	prosthetic group metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0060077	inhibitory synapse	IEP	Predict GO terms from Neighborhoods
MF	GO:0061598	molybdopterin adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061599	molybdopterin molybdotransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062237	protein localization to postsynapse	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071230	cellular response to amino acid stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0072578	neurotransmitter-gated ion channel clustering	IEP	Predict GO terms from Neighborhoods
BP	GO:0072579	glycine receptor clustering	IEP	Predict GO terms from Neighborhoods
CC	GO:0097060	synaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0097106	postsynaptic density organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0097112	gamma-aminobutyric acid receptor clustering	IEP	Predict GO terms from Neighborhoods
BP	GO:0097120	receptor localization to synapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0098690	glycinergic synapse	IEP	Predict GO terms from Neighborhoods
MF	GO:0098879	structural constituent of postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
BP	GO:0098880	maintenance of postsynaptic specialization structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0098918	structural constituent of synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0098953	receptor diffusion trapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0098970	postsynaptic neurotransmitter receptor diffusion trapping	IEP	Predict GO terms from Neighborhoods
CC	GO:0098982	GABA-ergic synapse	IEP	Predict GO terms from Neighborhoods
BP	GO:0099072	regulation of postsynaptic membrane neurotransmitter receptor levels	IEP	Predict GO terms from Neighborhoods
BP	GO:0099084	postsynaptic specialization organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0099091	postsynaptic specialization, intracellular component	IEP	Predict GO terms from Neighborhoods
CC	GO:0099144	anchored component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0099186	structural constituent of postsynapse	IEP	Predict GO terms from Neighborhoods
CC	GO:0099240	intrinsic component of synaptic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099558	maintenance of synapse structure	IEP	Predict GO terms from Neighborhoods
CC	GO:0099572	postsynaptic specialization	IEP	Predict GO terms from Neighborhoods
BP	GO:0099628	neurotransmitter receptor diffusion trapping	IEP	Predict GO terms from Neighborhoods
BP	GO:0099633	protein localization to postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0099645	neurotransmitter receptor localization to postsynaptic specialization membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:1900865	chloroplast RNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:1900871	chloroplast mRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902414	protein localization to cell junction	IEP	Predict GO terms from Neighborhoods
BP	GO:1903539	protein localization to postsynaptic membrane	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR031314	DNK_dom	267	521
IPR027417	P-loop_NTPase	262	528

External Links

No external refs found!

SOLTUB.AGRIA.G00000037416

Expression Profile

Co-expression Networks

Functional Annotation