Description : Pentatricopeptide repeat-containing protein, chloroplastic
Gene families : OG_02_0023835 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037748 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_8 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000792 | heterochromatin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001745 | compound eye morphogenesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005703 | polytene chromosome puff | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005844 | polysome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006417 | regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007399 | nervous system development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008266 | poly(U) RNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008406 | gonad development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008584 | male gonad development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008585 | female gonad development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009408 | response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009887 | animal organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009991 | response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010038 | response to metal ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010632 | regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010634 | positive regulation of epithelial cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016032 | viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016607 | nuclear speck | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019048 | modulation by virus of host process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019054 | modulation by virus of host cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019087 | transformation of host cell by virus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030324 | lung development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030334 | regulation of cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030335 | positive regulation of cell migration | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030371 | translation repressor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031667 | response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033592 | RNA strand annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034248 | regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035062 | omega speckle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035770 | ribonucleoprotein granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035821 | modulation of process of another organism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035864 | response to potassium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035865 | cellular response to potassium ion | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036310 | ATP-dependent DNA/DNA annealing activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036464 | cytoplasmic ribonucleoprotein granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040012 | regulation of locomotion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040017 | positive regulation of locomotion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042391 | regulation of membrane potential | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042594 | response to starvation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043186 | P granule | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043484 | regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044003 | modulation by symbiont of host process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044068 | modulation by symbiont of host cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045727 | positive regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045760 | positive regulation of action potential | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0047484 | regulation of response to osmotic stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048468 | cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048513 | animal organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048592 | eye morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048608 | reproductive structure development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048731 | system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048864 | stem cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051701 | biological process involved in interaction with host | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070848 | response to growth factor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070849 | response to epidermal growth factor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071216 | cellular response to biotic stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071241 | cellular response to inorganic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071248 | cellular response to metal ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071310 | cellular response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071363 | cellular response to growth factor stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071364 | cellular response to epidermal growth factor stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071495 | cellular response to endogenous stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072396 | response to cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072402 | response to DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072423 | response to DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090596 | sensory organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098687 | chromosomal region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098900 | regulation of action potential | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099080 | supramolecular complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140666 | annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901000 | regulation of response to salt stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903684 | regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903688 | positive regulation of border follicle cell migration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904577 | obsolete cellular response to tunicamycin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904579 | obsolete cellular response to thapsigargin | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990814 | DNA/DNA annealing activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990825 | sequence-specific mRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990826 | nucleoplasmic periphery of the nuclear pore complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000070 | regulation of response to water deprivation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000145 | regulation of cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000147 | positive regulation of cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |