SOLTUB.AGRIA.G00000037923

Description : Nuclear pore complex protein Nup188a

Gene families : OG_02_0017232 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037923
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_222

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005635	nuclear envelope	IEA	AHRD
CC	GO:0005643	nuclear pore	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006405	RNA export from nucleus	IEA	AHRD
BP	GO:0006606	protein import into nucleus	IEA	AHRD
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	AHRD
BP	GO:0015931	nucleobase-containing compound transport	None	Extended
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0017056	structural constituent of nuclear pore	IEA	AHRD
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044611	nuclear pore inner ring	IEA	AHRD
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050657	nucleic acid transport	None	Extended
BP	GO:0050658	RNA transport	None	Extended
BP	GO:0051028	mRNA transport	IEA	AHRD
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051236	establishment of RNA localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000315	organellar large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0002244	hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005762	mitochondrial large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0006457	protein folding	IEP	Predict GO terms from Neighborhoods
BP	GO:0006842	tricarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007021	tubulin complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007399	nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0009553	embryo sac development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
MF	GO:0015137	citrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015142	tricarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0015630	microtubule cytoskeleton	IEP	Predict GO terms from Neighborhoods
BP	GO:0015746	citrate transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0015934	large ribosomal subunit	IEP	Predict GO terms from Neighborhoods
BP	GO:0016036	cellular response to phosphate starvation	IEP	Predict GO terms from Neighborhoods
MF	GO:0019843	rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030154	cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0035618	root hair	IEP	Predict GO terms from Neighborhoods
BP	GO:0042908	xenobiotic transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0043014	alpha-tubulin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055072	iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0055076	transition metal ion homeostasis	IEP	Predict GO terms from Neighborhoods
MF	GO:0070180	large ribosomal subunit rRNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0080060	integument development	IEP	Predict GO terms from Neighborhoods
CC	GO:0098798	mitochondrial protein-containing complex	IEP	Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

External Links

No external refs found!

SOLTUB.AGRIA.G00000037923

Expression Profile

Co-expression Networks

Functional Annotation