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  5. SOLTUB.AGRIA.G00000037993

SOLTUB.AGRIA.G00000037993


Description : Endo-1,4-beta-xylanase 4


Gene families : OG_02_0017249 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000037993
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_189


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA AHRD
CC GO:0005618 cell wall IEA AHRD
BP GO:0008152 metabolic process IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0001708 cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
MF GO:0003700 DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
MF GO:0004084 branched-chain-amino-acid transaminase activity IEP Predict GO terms from Neighborhoods
CC GO:0005901 caveola IEP Predict GO terms from Neighborhoods
BP GO:0006304 DNA modification IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0008037 cell recognition IEP Predict GO terms from Neighborhoods
BP GO:0009559 embryo sac central cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0009933 meristem structural organization IEP Predict GO terms from Neighborhoods
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP Predict GO terms from Neighborhoods
BP GO:0010022 meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010023 proanthocyanidin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010048 vernalization response IEP Predict GO terms from Neighborhoods
BP GO:0010094 specification of carpel identity IEP Predict GO terms from Neighborhoods
BP GO:0010154 fruit development IEP Predict GO terms from Neighborhoods
BP GO:0010158 abaxial cell fate specification IEP Predict GO terms from Neighborhoods
BP GO:0010249 auxin conjugate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010254 nectary development IEP Predict GO terms from Neighborhoods
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
BP GO:0010450 inflorescence meristem growth IEP Predict GO terms from Neighborhoods
BP GO:0010500 transmitting tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010582 floral meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0016046 detection of fungus IEP Predict GO terms from Neighborhoods
BP GO:0016144 S-glycoside biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016208 AMP binding IEP Predict GO terms from Neighborhoods
MF GO:0016881 acid-amino acid ligase activity IEP Predict GO terms from Neighborhoods
BP GO:0018874 benzoate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0018958 phenol-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019758 glycosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019761 glucosinolate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031542 positive regulation of anthocyanin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0035197 siRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0035198 miRNA binding IEP Predict GO terms from Neighborhoods
CC GO:0043076 megasporocyte nucleus IEP Predict GO terms from Neighborhoods
CC GO:0043078 polar nucleus IEP Predict GO terms from Neighborhoods
BP GO:0044728 DNA methylation or demethylation IEP Predict GO terms from Neighborhoods
CC GO:0044853 plasma membrane raft IEP Predict GO terms from Neighborhoods
BP GO:0046189 phenol-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048358 mucilage pectin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0048479 style development IEP Predict GO terms from Neighborhoods
BP GO:0048481 plant ovule development IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048532 anatomical structure arrangement IEP Predict GO terms from Neighborhoods
BP GO:0048533 sporocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0048544 recognition of pollen IEP Predict GO terms from Neighborhoods
BP GO:0051321 meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0052318 regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052319 regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0052320 positive regulation of phytoalexin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0052322 positive regulation of phytoalexin biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0052625 4-aminobenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052626 benzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052627 vanillate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0052628 4-hydroxybenzoate amino acid synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060320 rejection of self pollen IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
MF GO:0070406 glutamine binding IEP Predict GO terms from Neighborhoods
BP GO:0090706 specification of plant organ position IEP Predict GO terms from Neighborhoods
MF GO:0102053 (-)-jasmonoyl-isoleucine synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0102057 jasmonoyl-valine synthetase activity IEP Predict GO terms from Neighborhoods
MF GO:0102058 jasmonoyl-leucine synthetase activity IEP Predict GO terms from Neighborhoods
BP GO:1900037 regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900370 positive regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1901182 regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901183 positive regulation of camalexin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902183 regulation of shoot apical meristem development IEP Predict GO terms from Neighborhoods
BP GO:1904159 megasporocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:1990058 fruit replum development IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR017853 Glycoside_hydrolase_SF 30 338
IPR001000 GH10_dom 41 325
No external refs found!