SOLTUB.AGRIA.G00000038097

Description : Beta-D-xylosidase family protein

Gene families : OG_02_0007034 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038097
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_25

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005774	vacuolar membrane	IEA	AHRD
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEA	AHRD
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
CC	GO:0009505	plant-type cell wall	IEA	AHRD
CC	GO:0009506	plasmodesma	IEA	AHRD
CC	GO:0009507	chloroplast	IEA	AHRD
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010214	seed coat development	IEA	AHRD
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031221	arabinan metabolic process	None	Extended
BP	GO:0031222	arabinan catabolic process	IEA	AHRD
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044347	cell wall polysaccharide catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045493	xylan catabolic process	IEA	AHRD
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEA	AHRD
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097599	xylanase activity	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:2000895	hemicellulose catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001667	ameboidal-type cell migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0004147	dihydrolipoamide branched chain acyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004451	isocitrate lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004565	beta-galactosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005275	amine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005504	fatty acid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005773	vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0005779	integral component of peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0006083	acetate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006097	glyoxylate cycle	IEP	Predict GO terms from Neighborhoods
BP	GO:0008643	carbohydrate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0009045	xylose isomerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009697	salicylic acid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010252	auxin homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010364	regulation of ethylene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010365	positive regulation of ethylene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010466	negative regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010930	negative regulation of auxin mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010951	negative regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015200	methylammonium transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015204	urea transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015757	galactose transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015840	urea transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015925	galactosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015976	carbon utilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0016049	cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0016098	monoterpenoid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016099	monoterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016102	diterpenoid biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016559	peroxisome fission	IEP	Predict GO terms from Neighborhoods
MF	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	IEP	Predict GO terms from Neighborhoods
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predict GO terms from Neighborhoods
BP	GO:0019323	pentose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0019755	one-carbon compound transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0021700	developmental maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030162	regulation of proteolysis	IEP	Predict GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030246	carbohydrate binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030523	dihydrolipoamide S-acyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030718	germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0031155	regulation of reproductive fruiting body development	IEP	Predict GO terms from Neighborhoods
CC	GO:0031231	intrinsic component of peroxisomal membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0031335	regulation of sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031337	positive regulation of sulfur amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0031405	lipoic acid binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031508	pericentric heterochromatin formation	IEP	Predict GO terms from Neighborhoods
CC	GO:0032586	protein storage vacuole membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0042645	mitochondrial nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0042732	D-xylose metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0042807	central vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0042843	D-xylose catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043086	negative regulation of catalytic activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043617	cellular response to sucrose starvation	IEP	Predict GO terms from Neighborhoods
CC	GO:0043674	columella	IEP	Predict GO terms from Neighborhoods
BP	GO:0044092	negative regulation of molecular function	IEP	Predict GO terms from Neighborhoods
BP	GO:0044375	regulation of peroxisome size	IEP	Predict GO terms from Neighborhoods
BP	GO:0045733	acetate catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045861	negative regulation of proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045995	regulation of embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046487	glyoxylate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046662	regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:0048021	regulation of melanin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048520	positive regulation of behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0048588	developmental cell growth	IEP	Predict GO terms from Neighborhoods
BP	GO:0048767	root hair elongation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050830	defense response to Gram-positive bacterium	IEP	Predict GO terms from Neighborhoods
MF	GO:0051119	sugar transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051248	negative regulation of protein metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051260	protein homooligomerization	IEP	Predict GO terms from Neighborhoods
BP	GO:0051336	regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052547	regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0052548	regulation of endopeptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052793	pectin acetylesterase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0055085	transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0061062	regulation of nematode larval development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061063	positive regulation of nematode larval development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070481	nuclear-transcribed mRNA catabolic process, non-stop decay	IEP	Predict GO terms from Neighborhoods
BP	GO:0070966	nuclear-transcribed mRNA catabolic process, no-go decay	IEP	Predict GO terms from Neighborhoods
BP	GO:0071695	anatomical structure maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071918	urea transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0075260	regulation of spore-bearing organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0080021	response to benzoic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0080037	negative regulation of cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0080167	response to karrikin	IEP	Predict GO terms from Neighborhoods
BP	GO:0080170	hydrogen peroxide transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0090351	seedling development	IEP	Predict GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0102811	geraniol 10-hydroxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0106240	labd-13Z-ene-9,15,16-triol synthase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0140719	constitutive heterochromatin formation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900908	regulation of olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900910	positive regulation of olefin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900911	regulation of olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1900913	positive regulation of olefin biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901046	positive regulation of oviposition	IEP	Predict GO terms from Neighborhoods
BP	GO:1901944	miltiradiene metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1901946	miltiradiene biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1902265	abscisic acid homeostasis	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001764	Glyco_hydro_3_N	104	350
IPR026891	Fn3-like	692	757
IPR002772	Glyco_hydro_3_C	392	622
IPR036881	Glyco_hydro_3_C_sf	392	625
IPR017853	Glycoside_hydrolase_SF	38	391

External Links

No external refs found!

SOLTUB.AGRIA.G00000038097

Expression Profile

Co-expression Networks

Functional Annotation