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  5. SOLTUB.AGRIA.G00000038417

SOLTUB.AGRIA.G00000038417


Description : replication factor-A carboxy-terminal domain protein


Gene families : OG_02_0002790 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038417
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_144


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002218 activation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0002253 activation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0002684 positive regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0002757 immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002758 innate immune response-activating signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002764 immune response-regulating signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0005516 calmodulin binding IEP Predict GO terms from Neighborhoods
BP GO:0007263 nitric oxide mediated signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0009267 cellular response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0009555 pollen development IEP Predict GO terms from Neighborhoods
BP GO:0009682 induced systemic resistance IEP Predict GO terms from Neighborhoods
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010150 leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:0010200 response to chitin IEP Predict GO terms from Neighborhoods
BP GO:0016036 cellular response to phosphate starvation IEP Predict GO terms from Neighborhoods
BP GO:0016143 S-glycoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019757 glycosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019760 glucosinolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019932 second-messenger-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0031669 cellular response to nutrient levels IEP Predict GO terms from Neighborhoods
BP GO:0042594 response to starvation IEP Predict GO terms from Neighborhoods
BP GO:0045088 regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0045089 positive regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0050778 positive regulation of immune response IEP Predict GO terms from Neighborhoods
BP GO:0062197 cellular response to chemical stress IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
BP GO:0080169 cellular response to boron-containing substance deprivation IEP Predict GO terms from Neighborhoods
BP GO:0090693 plant organ senescence IEP Predict GO terms from Neighborhoods
MF GO:1990841 promoter-specific chromatin binding IEP Predict GO terms from Neighborhoods
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012340 NA-bd_OB-fold 28 129
No external refs found!