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  5. SOLTUB.AGRIA.G00000038587

SOLTUB.AGRIA.G00000038587


Description : Nicalin


Gene families : OG_02_0011315 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038587
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
CC GO:0005783 endoplasmic reticulum IEA AHRD
BP GO:0009966 regulation of signal transduction IEA AHRD
CC GO:0016020 membrane IEA AHRD
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Type GO Term Name Evidence Source
BP GO:0000054 ribosomal subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0000055 ribosomal large subunit export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0000056 ribosomal small subunit export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0000741 karyogamy IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004427 inorganic diphosphate phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004817 cysteine-tRNA ligase activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005049 nuclear export signal receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0005215 transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005471 ATP:ADP antiporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005642 annulate lamellae IEP Predict GO terms from Neighborhoods
CC GO:0005643 nuclear pore IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005816 spindle pole body IEP Predict GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predict GO terms from Neighborhoods
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006811 ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0006999 nuclear pore organization IEP Predict GO terms from Neighborhoods
BP GO:0007006 mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007007 inner mitochondrial membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0007099 centriole replication IEP Predict GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008283 cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0009553 embryo sac development IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009846 pollen germination IEP Predict GO terms from Neighborhoods
BP GO:0009894 regulation of catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010197 polar nucleus fusion IEP Predict GO terms from Neighborhoods
BP GO:0010506 regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010824 regulation of centrosome duplication IEP Predict GO terms from Neighborhoods
MF GO:0015075 ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015217 ADP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015297 antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015865 purine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015866 ADP transport IEP Predict GO terms from Neighborhoods
BP GO:0015867 ATP transport IEP Predict GO terms from Neighborhoods
BP GO:0015868 purine ribonucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predict GO terms from Neighborhoods
MF GO:0017069 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0017070 U6 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0022804 active transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022853 active ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0022857 transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0030162 regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0030318 melanocyte differentiation IEP Predict GO terms from Neighborhoods
CC GO:0030425 dendrite IEP Predict GO terms from Neighborhoods
MF GO:0030619 U1 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030620 U2 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030621 U4 snRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0030623 U5 snRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0031023 microtubule organizing center organization IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031503 protein-containing complex localization IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032886 regulation of microtubule-based process IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033750 ribosome localization IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0034501 protein localization to kinetochore IEP Predict GO terms from Neighborhoods
BP GO:0034502 protein localization to chromosome IEP Predict GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:0035523 protein K29-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0036506 maintenance of unfolded protein IEP Predict GO terms from Neighborhoods
BP GO:0042176 regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042407 cristae formation IEP Predict GO terms from Neighborhoods
CC GO:0043025 neuronal cell body IEP Predict GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Predict GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
BP GO:0044313 protein K6-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0045048 protein insertion into ER membrane IEP Predict GO terms from Neighborhoods
BP GO:0045861 negative regulation of proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0046605 regulation of centrosome cycle IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046825 regulation of protein export from nucleus IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046931 pore complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0048284 organelle fusion IEP Predict GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Predict GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Predict GO terms from Neighborhoods
BP GO:0050821 protein stabilization IEP Predict GO terms from Neighborhoods
BP GO:0050931 pigment cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Predict GO terms from Neighborhoods
MF GO:0051087 chaperone binding IEP Predict GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051205 protein insertion into membrane IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051292 nuclear pore complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051503 adenine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0061608 nuclear import signal receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Predict GO terms from Neighborhoods
BP GO:0071108 protein K48-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071370 cellular response to gibberellin stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071459 protein localization to chromosome, centromeric region IEP Predict GO terms from Neighborhoods
BP GO:0072530 purine-containing compound transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0080135 regulation of cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:0098534 centriole assembly IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0140021 mitochondrial ADP transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140104 molecular carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900037 regulation of cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Predict GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901679 nucleotide transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903050 regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903083 protein localization to condensed chromosome IEP Predict GO terms from Neighborhoods
MF GO:1904288 BAT3 complex binding IEP Predict GO terms from Neighborhoods
BP GO:1904292 regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904294 positive regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904378 maintenance of unfolded protein involved in ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1990544 mitochondrial ATP transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007484 Peptidase_M28 224 331
No external refs found!