SOLTUB.AGRIA.G00000003866


Description : Extensin-like protein Dif54


Gene families : OG_02_0000285 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003866
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_135


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predict GO terms from Neighborhoods
BP GO:0001906 cell killing IEP Predict GO terms from Neighborhoods
MF GO:0003796 lysozyme activity IEP Predict GO terms from Neighborhoods
MF GO:0004568 chitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004797 thymidine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005375 copper ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005381 iron ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005385 zinc ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
BP GO:0006026 aminoglycan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006030 chitin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006032 chitin catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006821 chloride transport IEP Predict GO terms from Neighborhoods
BP GO:0006829 zinc ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006857 oligopeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0006949 syncytium formation IEP Predict GO terms from Neighborhoods
BP GO:0006972 hyperosmotic response IEP Predict GO terms from Neighborhoods
MF GO:0008649 rRNA methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008843 endochitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0009120 deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009501 amyloplast IEP Predict GO terms from Neighborhoods
CC GO:0009505 plant-type cell wall IEP Predict GO terms from Neighborhoods
BP GO:0009620 response to fungus IEP Predict GO terms from Neighborhoods
BP GO:0010225 response to UV-C IEP Predict GO terms from Neighborhoods
BP GO:0010447 response to acidic pH IEP Predict GO terms from Neighborhoods
MF GO:0010542 nitrate efflux transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015108 chloride transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015112 nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015293 symporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015334 high-affinity oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015386 potassium:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015513 high-affinity secondary active nitrite transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015675 nickel cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015691 cadmium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0015698 inorganic anion transport IEP Predict GO terms from Neighborhoods
BP GO:0015706 nitrate transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0015833 peptide transport IEP Predict GO terms from Neighborhoods
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0022821 solute:potassium antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0031167 rRNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0031640 killing of cells of another organism IEP Predict GO terms from Neighborhoods
BP GO:0034220 ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042126 nitrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042128 nitrate assimilation IEP Predict GO terms from Neighborhoods
BP GO:0042538 hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:0042886 amide transport IEP Predict GO terms from Neighborhoods
MF GO:0042887 amide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0042938 dipeptide transport IEP Predict GO terms from Neighborhoods
BP GO:0043201 response to leucine IEP Predict GO terms from Neighborhoods
BP GO:0046104 thymidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046125 pyrimidine deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046348 amino sugar catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0050832 defense response to fungus IEP Predict GO terms from Neighborhoods
MF GO:0051139 metal cation:proton antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0061783 peptidoglycan muralytic activity IEP Predict GO terms from Neighborhoods
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070475 rRNA base methylation IEP Predict GO terms from Neighborhoods
BP GO:0071577 zinc ion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0071916 dipeptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080052 response to histidine IEP Predict GO terms from Neighborhoods
BP GO:0080053 response to phenylalanine IEP Predict GO terms from Neighborhoods
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
BP GO:0098656 anion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0140102 catalytic activity, acting on a rRNA IEP Predict GO terms from Neighborhoods
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901349 glucosinolate transport IEP Predict GO terms from Neighborhoods
BP GO:1902025 nitrate import IEP Predict GO terms from Neighborhoods
BP GO:1902075 cellular response to salt IEP Predict GO terms from Neighborhoods
BP GO:1902476 chloride transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:1904680 peptide transmembrane transporter activity IEP Predict GO terms from Neighborhoods

No InterPro domains available for this sequence

No external refs found!