SOLTUB.AGRIA.G00000038868

Description : Disease resistance protein

Gene families : OG_02_0000002 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038868
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_223

Target	Alias	Description	ECC score	Gene Family Method
SOLTUB.AGRIA.G00000030552	No alias	Disease resistance protein	0.04	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038934	No alias	Disease resistance protein	0.05	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038943	No alias	Disease resistance N'-like protein	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030552	No alias	Disease resistance protein	0.04	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038934	No alias	Disease resistance protein	0.05	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038943	No alias	Disease resistance N'-like protein	0.11	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000030552	No alias	Disease resistance protein	0.04	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038934	No alias	Disease resistance protein	0.05	Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000038943	No alias	Disease resistance N'-like protein	0.11	Orthogroups with 8 Potato genotypes

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004016	adenylate cyclase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009620	response to fungus	None	Extended
MF	GO:0009975	cyclase activity	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016849	phosphorus-oxygen lyase activity	None	Extended
BP	GO:0042742	defense response to bacterium	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043621	protein self-association	IEA	AHRD
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	IEA	AHRD
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050829	defense response to Gram-negative bacterium	IEA	AHRD
BP	GO:0050832	defense response to fungus	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009416	response to light stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009751	response to salicylic acid	IEP	Predict GO terms from Neighborhoods
BP	GO:0016553	base conversion or substitution editing	IEP	Predict GO terms from Neighborhoods
BP	GO:0016554	cytidine to uridine editing	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	1	163
IPR027417	P-loop_NTPase	1	163

External Links

No external refs found!

SOLTUB.AGRIA.G00000038868

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation