SOLTUB.AGRIA.G00000039112

Description : Mannan endo-1,4-beta-mannosidase 1

Gene families : OG_02_0003175 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039112
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_64

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004567	beta-mannosidase activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	IEA	AHRD
BP	GO:0009845	seed germination	IEA	AHRD
BP	GO:0009900	dehiscence	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010047	fruit dehiscence	IEA	AHRD
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010412	mannan metabolic process	IEA	AHRD
MF	GO:0015923	mannosidase activity	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016985	mannan endo-1,4-beta-mannosidase activity	IEA	AHRD
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
CC	GO:0048046	apoplast	IEA	AHRD
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0061687	detoxification of inorganic compound	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071585	detoxification of cadmium ion	IEA	AHRD
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0071944	cell periphery	IEA	AHRD
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1990059	fruit valve development	IEA	AHRD

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004109	coproporphyrinogen oxidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004857	enzyme inhibitor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005615	extracellular space	IEP	Predict GO terms from Neighborhoods
BP	GO:0006782	protoporphyrinogen IX biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006836	neurotransmitter transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0009505	plant-type cell wall	IEP	Predict GO terms from Neighborhoods
BP	GO:0010288	response to lead ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010466	negative regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015101	organic cation transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015226	carnitine transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015651	quaternary ammonium group transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015695	organic cation transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015697	quaternary ammonium group transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015838	amino-acid betaine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015839	cadaverine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015844	monoamine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015879	carnitine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0015995	chlorophyll biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0017085	response to insecticide	IEP	Predict GO terms from Neighborhoods
BP	GO:0019632	shikimate metabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0030414	peptidase inhibitor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0035864	response to potassium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0035865	cellular response to potassium ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0045861	negative regulation of proteolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0046501	protoporphyrinogen IX metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048530	fruit morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051346	negative regulation of hydrolase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051597	response to methylmercury	IEP	Predict GO terms from Neighborhoods
BP	GO:0051937	catecholamine transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0052547	regulation of peptidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061134	peptidase regulator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0061135	endopeptidase regulator activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072337	modified amino acid transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0072349	modified amino acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0090493	catecholamine uptake	IEP	Predict GO terms from Neighborhoods
BP	GO:1900384	regulation of flavonol biosynthetic process	IEP	Predict GO terms from Neighborhoods
MF	GO:1990538	xylan O-acetyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1990937	xylan acetylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR001547	Glyco_hydro_5	37	324
IPR017853	Glycoside_hydrolase_SF	30	379

External Links

No external refs found!

SOLTUB.AGRIA.G00000039112

Expression Profile

Co-expression Networks

Functional Annotation