Predict GO terms from Neighborhoods
  1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000039467

SOLTUB.AGRIA.G00000039467


Description : Pectin lyase-like superfamily protein


Gene families : OG_02_0011609 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039467
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
BP GO:0008152 metabolic process IEA AHRD
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA AHRD
CC GO:0031224 intrinsic component of membrane IEA AHRD
BP GO:0048608 reproductive structure development IEA AHRD
BP GO:0048609 multicellular organismal reproductive process IEA AHRD
BP GO:0071555 cell wall organization IEA AHRD
CC GO:0071944 cell periphery IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002027 regulation of heart rate IEP Predict GO terms from Neighborhoods
BP GO:0002831 regulation of response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0003333 amino acid transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0004709 MAP kinase kinase kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004713 protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005938 cell cortex IEP Predict GO terms from Neighborhoods
BP GO:0006521 regulation of cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006865 amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0006909 phagocytosis IEP Predict GO terms from Neighborhoods
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0007260 tyrosine phosphorylation of STAT protein IEP Predict GO terms from Neighborhoods
BP GO:0008016 regulation of heart contraction IEP Predict GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009663 plasmodesma organization IEP Predict GO terms from Neighborhoods
BP GO:0009664 plant-type cell wall organization IEP Predict GO terms from Neighborhoods
BP GO:0009685 gibberellin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009686 gibberellin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009743 response to carbohydrate IEP Predict GO terms from Neighborhoods
BP GO:0009746 response to hexose IEP Predict GO terms from Neighborhoods
BP GO:0009750 response to fructose IEP Predict GO terms from Neighborhoods
BP GO:0009826 unidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0010037 response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0010078 maintenance of root meristem identity IEP Predict GO terms from Neighborhoods
BP GO:0010119 regulation of stomatal movement IEP Predict GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Predict GO terms from Neighborhoods
BP GO:0010222 stem vascular tissue pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010315 auxin export across the plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0010337 regulation of salicylic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010344 seed oilbody biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010565 regulation of cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010962 regulation of glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010981 regulation of cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0012506 vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0012510 trans-Golgi network transport vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0015171 amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0018108 peptidyl-tyrosine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0018212 peptidyl-tyrosine modification IEP Predict GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Predict GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0030658 transport vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030659 cytoplasmic vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030660 Golgi-associated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030662 coated vesicle membrane IEP Predict GO terms from Neighborhoods
CC GO:0030665 clathrin-coated vesicle membrane IEP Predict GO terms from Neighborhoods
MF GO:0030957 Tat protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031156 regulation of sorocarp development IEP Predict GO terms from Neighborhoods
BP GO:0031347 regulation of defense response IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0032101 regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032102 negative regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032103 positive regulation of response to external stimulus IEP Predict GO terms from Neighborhoods
BP GO:0032350 regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032352 positive regulation of hormone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032388 positive regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032885 regulation of polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032950 regulation of beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032951 regulation of beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033157 regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0033238 regulation of cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033240 positive regulation of cellular amine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034284 response to monosaccharide IEP Predict GO terms from Neighborhoods
BP GO:0034330 cell junction organization IEP Predict GO terms from Neighborhoods
BP GO:0036289 peptidyl-serine autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042304 regulation of fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042306 regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042307 positive regulation of protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Predict GO terms from Neighborhoods
BP GO:0044057 regulation of system process IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045216 cell-cell junction organization IEP Predict GO terms from Neighborhoods
CC GO:0045335 phagocytic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0045764 positive regulation of cellular amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045995 regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0046777 protein autophosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050921 positive regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050922 negative regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050926 regulation of positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0050928 negative regulation of positive chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051222 positive regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0061118 regulation of positive chemotaxis to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0061123 negative regulation of positive chemotaxis to cAMP IEP Predict GO terms from Neighborhoods
BP GO:0062012 regulation of small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071244 cellular response to carbon dioxide IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0080134 regulation of response to stress IEP Predict GO terms from Neighborhoods
BP GO:0080140 regulation of jasmonic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0090316 positive regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
BP GO:0090354 regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090355 positive regulation of auxin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090357 regulation of tryptophan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090358 positive regulation of tryptophan metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
BP GO:1900034 regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900036 positive regulation of cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:1900056 negative regulation of leaf senescence IEP Predict GO terms from Neighborhoods
BP GO:1900180 regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900182 positive regulation of protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:1900424 regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1900425 negative regulation of defense response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:1901141 regulation of lignin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902456 regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1902458 positive regulation of stomatal opening IEP Predict GO terms from Neighborhoods
BP GO:1903522 regulation of blood circulation IEP Predict GO terms from Neighborhoods
BP GO:1903779 regulation of cardiac conduction IEP Predict GO terms from Neighborhoods
BP GO:1904892 regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904894 positive regulation of receptor signaling pathway via STAT IEP Predict GO terms from Neighborhoods
BP GO:1904951 positive regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2000035 regulation of stem cell division IEP Predict GO terms from Neighborhoods
BP GO:2000069 regulation of post-embryonic root development IEP Predict GO terms from Neighborhoods
BP GO:2001006 regulation of cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001009 regulation of plant-type cell wall cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR011050 Pectin_lyase_fold/virulence 67 468
IPR000743 Glyco_hydro_28 168 455
No external refs found!