SOLTUB.AGRIA.G00000039723


Description : Zinc finger (Ran-binding) family protein


Gene families : OG_02_0001316 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039723
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_182


Type GO Term Name Evidence Source
MF GO:0001530 lipopolysaccharide binding IEA AHRD
MF GO:0003676 nucleic acid binding IEA AHRD
MF GO:0003723 RNA binding IEA AHRD
MF GO:0005515 protein binding IEA AHRD
CC GO:0005634 nucleus IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
BP GO:0006396 RNA processing IEA AHRD
BP GO:0006397 mRNA processing IEA AHRD
BP GO:0008150 biological_process IEA AHRD
BP GO:0008380 RNA splicing IEA AHRD
MF GO:0046872 metal ion binding IEA AHRD
Type GO Term Name Evidence Source
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 49 78
IPR001876 Znf_RanBP2 3 31
IPR001876 Znf_RanBP2 104 133
IPR036443 Znf_RanBP2_sf 2 32
IPR036443 Znf_RanBP2_sf 102 135
IPR036443 Znf_RanBP2_sf 45 79
No external refs found!