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  5. SOLTUB.AGRIA.G00000039748

SOLTUB.AGRIA.G00000039748


Description : Zinc finger (Ran-binding) family protein


Gene families : OG_02_0001316 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039748
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_182


Type GO Term Name Evidence Source
MF GO:0005488 binding IEA AHRD
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Type GO Term Name Evidence Source
MF GO:0001530 lipopolysaccharide binding IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Predict GO terms from Neighborhoods
BP GO:0006623 protein targeting to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0007034 vacuolar transport IEP Predict GO terms from Neighborhoods
MF GO:0008289 lipid binding IEP Predict GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Predict GO terms from Neighborhoods
MF GO:0008429 phosphatidylethanolamine binding IEP Predict GO terms from Neighborhoods
BP GO:0009648 photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0009744 response to sucrose IEP Predict GO terms from Neighborhoods
BP GO:0009910 negative regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0009911 positive regulation of flower development IEP Predict GO terms from Neighborhoods
BP GO:0010022 meristem determinacy IEP Predict GO terms from Neighborhoods
BP GO:0010030 positive regulation of seed germination IEP Predict GO terms from Neighborhoods
BP GO:0010229 inflorescence development IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0034285 response to disaccharide IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0040034 regulation of development, heterochronic IEP Predict GO terms from Neighborhoods
BP GO:0048506 regulation of timing of meristematic phase transition IEP Predict GO terms from Neighborhoods
BP GO:0048509 regulation of meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Predict GO terms from Neighborhoods
BP GO:0048572 short-day photoperiodism IEP Predict GO terms from Neighborhoods
BP GO:0048573 photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048575 short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0072665 protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0072666 establishment of protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0090344 obsolete negative regulation of cell aging IEP Predict GO terms from Neighborhoods
BP GO:2000242 negative regulation of reproductive process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036443 Znf_RanBP2_sf 102 135
IPR036443 Znf_RanBP2_sf 46 79
IPR036443 Znf_RanBP2_sf 2 32
IPR001876 Znf_RanBP2 104 133
IPR001876 Znf_RanBP2 49 79
No external refs found!