SOLTUB.AGRIA.G00000039798

Description : Reticulon-like protein

Gene families : OG_02_0007216 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039798
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_81

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
CC	GO:0005773	vacuole	IEA	AHRD
CC	GO:0005788	endoplasmic reticulum lumen	IEA	AHRD
CC	GO:0005794	Golgi apparatus	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007029	endoplasmic reticulum organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009504	cell plate	IEA	AHRD
CC	GO:0009510	plasmodesmatal desmotubule	IEA	AHRD
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEA	AHRD
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0030176	integral component of endoplasmic reticulum membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031227	intrinsic component of endoplasmic reticulum membrane	None	Extended
CC	GO:0031300	intrinsic component of organelle membrane	None	Extended
CC	GO:0031301	integral component of organelle membrane	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
CC	GO:0071458	integral component of cytoplasmic side of endoplasmic reticulum membrane	IEA	AHRD
CC	GO:0071782	endoplasmic reticulum tubular network	IEA	AHRD
BP	GO:0071786	endoplasmic reticulum tubular network organization	IEA	AHRD
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080167	response to karrikin	IEA	AHRD
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098827	endoplasmic reticulum subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000149	SNARE binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000220	vacuolar proton-transporting V-type ATPase, V0 domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0000331	contractile vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0000919	cell plate assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0001775	cell activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002252	immune effector process	IEP	Predict GO terms from Neighborhoods
BP	GO:0002263	cell activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002274	myeloid leukocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002275	myeloid cell activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002366	leukocyte activation involved in immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002443	leukocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002444	myeloid leukocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002521	leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0002573	myeloid leukocyte differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0004462	lactoylglutathione lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005484	SNAP receptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005765	lysosomal membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005774	vacuolar membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005886	plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0005935	cellular bud neck	IEP	Predict GO terms from Neighborhoods
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006089	lactate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006623	protein targeting to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0006749	glutathione metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006887	exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006892	post-Golgi vesicle-mediated transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006893	Golgi to plasma membrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006897	endocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0006970	response to osmotic stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0007033	vacuole organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007034	vacuolar transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0008021	synaptic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0009438	methylglyoxal metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009651	response to salt stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0009920	cell plate formation involved in plant-type cell wall biogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010118	stomatal movement	IEP	Predict GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0019200	carbohydrate kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	Predict GO terms from Neighborhoods
BP	GO:0030099	myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030133	transport vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030139	endocytic vesicle	IEP	Predict GO terms from Neighborhoods
CC	GO:0030141	secretory granule	IEP	Predict GO terms from Neighborhoods
BP	GO:0030316	osteoclast differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030427	site of polarized growth	IEP	Predict GO terms from Neighborhoods
CC	GO:0030658	transport vesicle membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0030666	endocytic vesicle membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0030897	HOPS complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031201	SNARE complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0031901	early endosome membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032940	secretion by cell	IEP	Predict GO terms from Neighborhoods
CC	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033179	proton-transporting V-type ATPase, V0 domain	IEP	Predict GO terms from Neighborhoods
CC	GO:0033263	CORVET complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	Predict GO terms from Neighborhoods
BP	GO:0035493	SNARE complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0036230	granulocyte activation	IEP	Predict GO terms from Neighborhoods
BP	GO:0042180	cellular ketone metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042182	ketone catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043299	leukocyte degranulation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045055	regulated exocytosis	IEP	Predict GO terms from Neighborhoods
BP	GO:0045321	leukocyte activation	IEP	Predict GO terms from Neighborhoods
CC	GO:0045335	phagocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0046185	aldehyde catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046903	secretion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051596	methylglyoxal catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	Predict GO terms from Neighborhoods
CC	GO:0070382	exocytic vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:0072659	protein localization to plasma membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0072665	protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
BP	GO:0072666	establishment of protein localization to vacuole	IEP	Predict GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0098852	lytic vacuole membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0098876	vesicle-mediated transport to the plasma membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0099023	vesicle tethering complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0099503	secretory vesicle	IEP	Predict GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Predict GO terms from Neighborhoods
BP	GO:1990778	protein localization to cell periphery	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003388	Reticulon	63	215

External Links

No external refs found!

SOLTUB.AGRIA.G00000039798

Expression Profile

Co-expression Networks

Functional Annotation