SOLTUB.AGRIA.G00000039942

Description : Sodium-bile acid cotransporter, putative

Gene families : OG_02_0011555 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039942
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_202

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005319	lipid transporter activity	None	Extended
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
MF	GO:0005488	binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006848	pyruvate transport	None	Extended
BP	GO:0006849	plasma membrane pyruvate transport	IEA	AHRD
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009528	plastid inner membrane	None	Extended
CC	GO:0009534	chloroplast thylakoid	IEA	AHRD
CC	GO:0009579	thylakoid	None	Extended
BP	GO:0009605	response to external stimulus	IEA	AHRD
CC	GO:0009706	chloroplast inner membrane	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015125	bile acid transmembrane transporter activity	IEA	AHRD
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015293	symporter activity	IEA	AHRD
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015718	monocarboxylic acid transport	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0015850	organic hydroxy compound transport	IEA	AHRD
BP	GO:0015887	pantothenate transmembrane transport	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0016144	S-glycoside biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	IEA	AHRD
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	IEA	AHRD
CC	GO:0019866	organelle inner membrane	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031969	chloroplast membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033993	response to lipid	IEA	AHRD
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035461	vitamin transmembrane transport	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	IEA	AHRD
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEA	AHRD
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0050789	regulation of biological process	IEA	AHRD
MF	GO:0050833	pyruvate transmembrane transporter activity	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051180	vitamin transport	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072337	modified amino acid transport	None	Extended
CC	GO:0098590	plasma membrane region	IEA	AHRD
BP	GO:0098656	anion transmembrane transport	None	Extended
BP	GO:0098657	import into cell	None	Extended
BP	GO:0098717	pantothenate import across plasma membrane	IEA	AHRD
BP	GO:0098739	import across plasma membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901475	pyruvate transmembrane transport	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901659	glycosyl compound biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	IEA	AHRD
BP	GO:1903825	organic acid transmembrane transport	None	Extended
BP	GO:1905039	carboxylic acid transmembrane transport	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0001942	hair follicle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004519	endonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004521	endoribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004525	ribonuclease III activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004540	ribonuclease activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Predict GO terms from Neighborhoods
BP	GO:0007051	spindle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0007293	germarium-derived egg chamber formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008285	negative regulation of cell population proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009535	chloroplast thylakoid membrane	IEP	Predict GO terms from Neighborhoods
CC	GO:0009543	chloroplast thylakoid lumen	IEP	Predict GO terms from Neighborhoods
BP	GO:0009615	response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0009616	RNAi-mediated antiviral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0009644	response to high light intensity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009664	plant-type cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0009827	plant-type cell wall modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009880	embryonic pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	Predict GO terms from Neighborhoods
BP	GO:0010074	maintenance of meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010117	photoprotection	IEP	Predict GO terms from Neighborhoods
BP	GO:0010216	maintenance of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010267	ta-siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010431	seed maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010721	negative regulation of cell development	IEP	Predict GO terms from Neighborhoods
CC	GO:0012505	endomembrane system	IEP	Predict GO terms from Neighborhoods
BP	GO:0014013	regulation of gliogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0014014	negative regulation of gliogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016441	post-transcriptional gene silencing	IEP	Predict GO terms from Neighborhoods
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0019217	regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0021537	telencephalon development	IEP	Predict GO terms from Neighborhoods
BP	GO:0021953	central nervous system neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0022404	molting cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022405	hair cycle process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022414	reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0030030	cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030326	embryonic limb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030422	siRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031047	gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0031332	RNAi effector complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0031641	regulation of myelination	IEP	Predict GO terms from Neighborhoods
CC	GO:0031977	thylakoid lumen	IEP	Predict GO terms from Neighborhoods
CC	GO:0031978	plastid thylakoid lumen	IEP	Predict GO terms from Neighborhoods
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032989	cellular component morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032990	cell part morphogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0034357	photosynthetic membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0035051	cardiocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0035107	appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035108	limb morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035113	embryonic appendage morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035194	post-transcriptional gene silencing by RNA	IEP	Predict GO terms from Neighborhoods
BP	GO:0035196	miRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0035239	tube morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0035295	tube development	IEP	Predict GO terms from Neighborhoods
BP	GO:0036404	obsolete conversion of ds siRNA to ss siRNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0042651	thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045596	negative regulation of cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045685	regulation of glial cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0045735	nutrient reservoir activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045922	negative regulation of fatty acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046320	regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046322	negative regulation of fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048363	mucilage pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048523	negative regulation of cellular process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048565	digestive tract development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048598	embryonic morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048609	multicellular organismal reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048729	tissue morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048730	epidermis morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048812	neuron projection morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0048858	cell projection morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050767	regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0050768	negative regulation of neurogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0051214	RNAi-mediated antiviral immunity against RNA virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051607	defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051960	regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0051961	negative regulation of nervous system development	IEP	Predict GO terms from Neighborhoods
CC	GO:0055035	plastid thylakoid membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0060251	regulation of glial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060253	negative regulation of glial cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0060284	regulation of cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
MF	GO:0061980	regulatory RNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0065001	specification of axis polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070918	small regulatory ncRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0070922	RISC complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071695	anatomical structure maturation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0080001	mucilage extrusion from seed coat	IEP	Predict GO terms from Neighborhoods
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0090501	RNA phosphodiester bond hydrolysis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120039	plasma membrane bounded cell projection morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0140546	defense response to symbiont	IEP	Predict GO terms from Neighborhoods
BP	GO:1901562	response to paraquat	IEP	Predict GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000628	regulation of miRNA metabolic process	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002657	BilAc:Na_symport/Acr3	140	314

External Links

No external refs found!

SOLTUB.AGRIA.G00000039942

Expression Profile

Co-expression Networks

Functional Annotation