SOLTUB.AGRIA.G00000040224


Description : tRNA dimethylallyltransferase


Gene families : OG_02_0017621 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000040224
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_175


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0001701 in utero embryonic development IEP Predict GO terms from Neighborhoods
MF GO:0003711 transcription elongation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0003941 L-serine ammonia-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0005452 solute:inorganic anion antiporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005925 focal adhesion IEP Predict GO terms from Neighborhoods
BP GO:0006276 plasmid maintenance IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006563 L-serine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006565 L-serine catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0007094 mitotic spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0007286 spermatid development IEP Predict GO terms from Neighborhoods
BP GO:0007346 regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007549 dosage compensation IEP Predict GO terms from Neighborhoods
MF GO:0008721 D-serine ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0009048 dosage compensation by inactivation of X chromosome IEP Predict GO terms from Neighborhoods
BP GO:0009069 serine family amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009070 serine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009071 serine family amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009436 glyoxylate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009441 glycolate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010036 response to boron-containing substance IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
CC GO:0010445 nuclear dicing body IEP Predict GO terms from Neighborhoods
BP GO:0010724 regulation of definitive erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0010950 positive regulation of endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010952 positive regulation of peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:0014072 response to isoquinoline alkaloid IEP Predict GO terms from Neighborhoods
MF GO:0015301 obsolete anion:anion antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0016594 glycine binding IEP Predict GO terms from Neighborhoods
MF GO:0016597 amino acid binding IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016841 ammonia-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016854 racemase and epimerase activity IEP Predict GO terms from Neighborhoods
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predict GO terms from Neighborhoods
BP GO:0016926 protein desumoylation IEP Predict GO terms from Neighborhoods
MF GO:0018114 threonine racemase activity IEP Predict GO terms from Neighborhoods
BP GO:0018249 protein dehydration IEP Predict GO terms from Neighborhoods
BP GO:0019478 D-amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022605 mammalian oogenesis stage IEP Predict GO terms from Neighborhoods
CC GO:0030055 cell-substrate junction IEP Predict GO terms from Neighborhoods
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
MF GO:0030165 PDZ domain binding IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0030378 serine racemase activity IEP Predict GO terms from Neighborhoods
MF GO:0030848 threo-3-hydroxyaspartate ammonia-lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0031053 primary miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031329 regulation of cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031440 regulation of mRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031577 spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033045 regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033046 negative regulation of sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0033048 negative regulation of mitotic sister chromatid segregation IEP Predict GO terms from Neighborhoods
BP GO:0034052 positive regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034308 primary alcohol metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034310 primary alcohol catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0034458 3'-5' RNA helicase activity IEP Predict GO terms from Neighborhoods
BP GO:0034612 response to tumor necrosis factor IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0035445 borate transmembrane transport IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0036088 D-serine catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predict GO terms from Neighborhoods
BP GO:0042219 cellular modified amino acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042866 pyruvate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043085 positive regulation of catalytic activity IEP Predict GO terms from Neighborhoods
BP GO:0043278 response to morphine IEP Predict GO terms from Neighborhoods
BP GO:0043279 response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0044093 positive regulation of molecular function IEP Predict GO terms from Neighborhoods
BP GO:0044788 modulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044794 positive regulation by host of viral process IEP Predict GO terms from Neighborhoods
BP GO:0044827 modulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
BP GO:0044829 positive regulation by host of viral genome replication IEP Predict GO terms from Neighborhoods
CC GO:0045177 apical part of cell IEP Predict GO terms from Neighborhoods
BP GO:0045637 regulation of myeloid cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045646 regulation of erythrocyte differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045786 negative regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0045839 negative regulation of mitotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0045841 negative regulation of mitotic metaphase/anaphase transition IEP Predict GO terms from Neighborhoods
BP GO:0045930 negative regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046164 alcohol catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046185 aldehyde catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046296 glycolate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046416 D-amino acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046437 D-amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046487 glyoxylate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046713 borate transport IEP Predict GO terms from Neighborhoods
MF GO:0046715 active borate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0047661 amino-acid racemase activity IEP Predict GO terms from Neighborhoods
BP GO:0048160 primary follicle stage IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0051270 obsolete regulation of cellular component movement IEP Predict GO terms from Neighborhoods
BP GO:0051446 positive regulation of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051728 cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051729 germline cell cycle switching, mitotic to meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051784 negative regulation of nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0051851 modulation by host of symbiont process IEP Predict GO terms from Neighborhoods
BP GO:0051985 negative regulation of chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0060184 cell cycle switching IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
MF GO:0070137 ubiquitin-like protein-specific endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0070139 SUMO-specific endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0070178 D-serine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0070179 D-serine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
BP GO:0071173 spindle assembly checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0071174 mitotic spindle checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0080029 cellular response to boron-containing substance levels IEP Predict GO terms from Neighborhoods
BP GO:0110104 mRNA alternative polyadenylation IEP Predict GO terms from Neighborhoods
MF GO:0140323 solute:anion antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900363 regulation of mRNA polyadenylation IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1902100 negative regulation of metaphase/anaphase transition of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1905818 regulation of chromosome separation IEP Predict GO terms from Neighborhoods
BP GO:1905819 negative regulation of chromosome separation IEP Predict GO terms from Neighborhoods
MF GO:1990247 N6-methyladenosine-containing RNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000116 regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2000736 regulation of stem cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:2000816 negative regulation of mitotic sister chromatid separation IEP Predict GO terms from Neighborhoods
BP GO:2001056 positive regulation of cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
BP GO:2001251 negative regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027417 P-loop_NTPase 19 209
No external refs found!